Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC26.39■■□□□ 1.82
CLTCL1P53675 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CLTCL1P53675 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CLTCL1P53675 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CLTCL1P53675 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC26.39■■□□□ 1.81
CLTCL1P53675 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CLTCL1P53675 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC26.39■■□□□ 1.81
CLTCL1P53675 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
CLTCL1P53675 PTGES2-AS1-201ENST00000443493 2100 ntBASIC26.39■■□□□ 1.81
CLTCL1P53675 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
CLTCL1P53675 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC26.39■■□□□ 1.81
CLTCL1P53675 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
CLTCL1P53675 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC26.39■■□□□ 1.81
CLTCL1P53675 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CLTCL1P53675 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CLTCL1P53675 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CLTCL1P53675 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CLTCL1P53675 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC26.38■■□□□ 1.81
CLTCL1P53675 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CLTCL1P53675 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CLTCL1P53675 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC26.38■■□□□ 1.81
CLTCL1P53675 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CLTCL1P53675 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC26.38■■□□□ 1.81
CLTCL1P53675 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC26.38■■□□□ 1.81
CLTCL1P53675 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC26.38■■□□□ 1.81
CLTCL1P53675 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC26.38■■□□□ 1.81
CLTCL1P53675 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC26.38■■□□□ 1.81
CLTCL1P53675 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CLTCL1P53675 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
CLTCL1P53675 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CLTCL1P53675 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC26.37■■□□□ 1.81
CLTCL1P53675 AC243591.1-201ENST00000452967 1364 ntBASIC26.37■■□□□ 1.81
CLTCL1P53675 KRT18P67-201ENST00000432816 1264 ntBASIC26.37■■□□□ 1.81
CLTCL1P53675 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC26.37■■□□□ 1.81
CLTCL1P53675 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC26.37■■□□□ 1.81
CLTCL1P53675 AP001005.1-201ENST00000571755 1248 ntBASIC26.37■■□□□ 1.81
CLTCL1P53675 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CLTCL1P53675 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CLTCL1P53675 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CLTCL1P53675 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC26.37■■□□□ 1.81
CLTCL1P53675 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
CLTCL1P53675 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC26.36■■□□□ 1.81
CLTCL1P53675 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC26.36■■□□□ 1.81
CLTCL1P53675 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC26.36■■□□□ 1.81
CLTCL1P53675 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC26.36■■□□□ 1.81
CLTCL1P53675 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC26.36■■□□□ 1.81
CLTCL1P53675 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC26.36■■□□□ 1.81
CLTCL1P53675 AC112777.1-201ENST00000540175 1423 ntBASIC26.36■■□□□ 1.81
CLTCL1P53675 LINC01126-201ENST00000623515 1646 ntBASIC26.36■■□□□ 1.81
CLTCL1P53675 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC26.36■■□□□ 1.81
CLTCL1P53675 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CLTCL1P53675 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC26.36■■□□□ 1.81
CLTCL1P53675 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
CLTCL1P53675 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CLTCL1P53675 PAM16-208ENST00000573553 722 ntTSL 2 BASIC26.36■■□□□ 1.81
CLTCL1P53675 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
CLTCL1P53675 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC26.35■■□□□ 1.81
CLTCL1P53675 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CLTCL1P53675 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
CLTCL1P53675 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CLTCL1P53675 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC26.35■■□□□ 1.81
CLTCL1P53675 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CLTCL1P53675 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC26.35■■□□□ 1.81
CLTCL1P53675 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CLTCL1P53675 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CLTCL1P53675 LINC01711-201ENST00000598340 967 ntBASIC26.35■■□□□ 1.81
CLTCL1P53675 AP001269.4-201ENST00000609611 512 ntBASIC26.35■■□□□ 1.81
CLTCL1P53675 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CLTCL1P53675 COBL-210ENST00000632460 1941 ntTSL 5 BASIC26.34■■□□□ 1.81
CLTCL1P53675 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 IL9RP2-201ENST00000423948 1312 ntBASIC26.34■■□□□ 1.81
CLTCL1P53675 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC26.34■■□□□ 1.81
CLTCL1P53675 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CLTCL1P53675 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CLTCL1P53675 FGFR3P6-201ENST00000457012 610 ntBASIC26.34■■□□□ 1.81
CLTCL1P53675 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC26.34■■□□□ 1.81
CLTCL1P53675 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
CLTCL1P53675 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CLTCL1P53675 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLTCL1P53675 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CLTCL1P53675 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC26.33■■□□□ 1.81
CLTCL1P53675 AC079776.4-201ENST00000511039 504 ntBASIC26.33■■□□□ 1.81
CLTCL1P53675 BX640515.1-201ENST00000617215 977 ntBASIC26.33■■□□□ 1.81
CLTCL1P53675 NME4-212ENST00000621774 904 ntTSL 3 BASIC26.33■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms