Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
EFNA3P52797 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.28■□□□□ 0.36
EFNA3P52797 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 AC093525.10-201ENST00000625130 1569 ntBASIC17.28■□□□□ 0.36
EFNA3P52797 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 AL031598.1-201ENST00000561511 1773 ntBASIC17.28■□□□□ 0.36
EFNA3P52797 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.28■□□□□ 0.36
EFNA3P52797 AL163051.1-201ENST00000569214 1512 ntBASIC17.28■□□□□ 0.36
EFNA3P52797 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.28■□□□□ 0.36
EFNA3P52797 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.28■□□□□ 0.36
EFNA3P52797 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.28■□□□□ 0.36
EFNA3P52797 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
EFNA3P52797 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
EFNA3P52797 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.28■□□□□ 0.36
EFNA3P52797 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.28■□□□□ 0.36
EFNA3P52797 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
EFNA3P52797 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
EFNA3P52797 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
EFNA3P52797 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
EFNA3P52797 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA3P52797 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA3P52797 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA3P52797 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNA3P52797 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.27■□□□□ 0.36
EFNA3P52797 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA3P52797 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA3P52797 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA3P52797 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
EFNA3P52797 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA3P52797 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
EFNA3P52797 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNA3P52797 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA3P52797 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA3P52797 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.27■□□□□ 0.36
EFNA3P52797 MIR3180-4-201ENST00000582223 153 ntBASIC17.27■□□□□ 0.36
EFNA3P52797 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.27■□□□□ 0.36
EFNA3P52797 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.27■□□□□ 0.36
EFNA3P52797 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.27■□□□□ 0.36
EFNA3P52797 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.27■□□□□ 0.36
EFNA3P52797 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.27■□□□□ 0.35
EFNA3P52797 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
EFNA3P52797 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.27■□□□□ 0.35
EFNA3P52797 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
EFNA3P52797 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC17.27■□□□□ 0.35
EFNA3P52797 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.27■□□□□ 0.35
EFNA3P52797 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.27■□□□□ 0.35
EFNA3P52797 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFNA3P52797 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
EFNA3P52797 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
EFNA3P52797 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNA3P52797 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
EFNA3P52797 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.26■□□□□ 0.35
EFNA3P52797 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNA3P52797 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.26■□□□□ 0.35
EFNA3P52797 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.26■□□□□ 0.35
EFNA3P52797 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC17.26■□□□□ 0.35
EFNA3P52797 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.26■□□□□ 0.35
EFNA3P52797 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.26■□□□□ 0.35
EFNA3P52797 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.26■□□□□ 0.35
EFNA3P52797 AC093458.2-201ENST00000623150 629 ntBASIC17.26■□□□□ 0.35
EFNA3P52797 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
EFNA3P52797 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.26■□□□□ 0.35
EFNA3P52797 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNA3P52797 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.25■□□□□ 0.35
EFNA3P52797 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EFNA3P52797 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
EFNA3P52797 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNA3P52797 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNA3P52797 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
EFNA3P52797 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.25■□□□□ 0.35
EFNA3P52797 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms