Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1P51610 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.08■□□□□ 0.16
HCFC1P51610 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1P51610 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.08■□□□□ 0.16
HCFC1P51610 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1P51610 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HCFC1P51610 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC1P51610 KRT18P67-201ENST00000432816 1264 ntBASIC16.08■□□□□ 0.16
HCFC1P51610 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC1P51610 FAM197Y8-203ENST00000450145 560 ntBASIC16.08■□□□□ 0.16
HCFC1P51610 SLC25A1P1-201ENST00000528351 927 ntBASIC16.08■□□□□ 0.16
HCFC1P51610 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.08■□□□□ 0.16
HCFC1P51610 AC005332.3-201ENST00000589904 676 ntBASIC16.08■□□□□ 0.16
HCFC1P51610 MIR7706-201ENST00000613747 67 ntBASIC16.08■□□□□ 0.16
HCFC1P51610 FP475955.4-201ENST00000623131 1990 ntBASIC16.08■□□□□ 0.16
HCFC1P51610 Z98044.1-201ENST00000632503 1764 ntBASIC16.08■□□□□ 0.16
HCFC1P51610 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1P51610 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1P51610 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.08■□□□□ 0.16
HCFC1P51610 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1P51610 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HCFC1P51610 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1P51610 HEIH-201ENST00000623091 1652 ntBASIC16.07■□□□□ 0.16
HCFC1P51610 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.07■□□□□ 0.16
HCFC1P51610 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.07■□□□□ 0.16
HCFC1P51610 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.07■□□□□ 0.16
HCFC1P51610 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.07■□□□□ 0.16
HCFC1P51610 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.07■□□□□ 0.16
HCFC1P51610 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.07■□□□□ 0.16
HCFC1P51610 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HCFC1P51610 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HCFC1P51610 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.07■□□□□ 0.16
HCFC1P51610 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 AC145285.3-201ENST00000564603 959 ntBASIC16.07■□□□□ 0.16
HCFC1P51610 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.07■□□□□ 0.16
HCFC1P51610 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 KRT8P50-201ENST00000562022 1438 ntBASIC16.07■□□□□ 0.16
HCFC1P51610 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HCFC1P51610 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HCFC1P51610 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.06■□□□□ 0.16
HCFC1P51610 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 MIR564-202ENST00000385049 94 ntBASIC16.06■□□□□ 0.16
HCFC1P51610 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 AL590627.1-203ENST00000421194 1026 ntBASIC16.06■□□□□ 0.16
HCFC1P51610 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.06■□□□□ 0.16
HCFC1P51610 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
HCFC1P51610 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.06■□□□□ 0.16
HCFC1P51610 AC011840.4-201ENST00000578471 627 ntBASIC16.06■□□□□ 0.16
HCFC1P51610 AC139530.3-201ENST00000620344 690 ntBASIC16.06■□□□□ 0.16
HCFC1P51610 AC148477.8-201ENST00000624298 468 ntBASIC16.06■□□□□ 0.16
HCFC1P51610 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
HCFC1P51610 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HCFC1P51610 KRT8P32-201ENST00000512863 1461 ntBASIC16.06■□□□□ 0.16
HCFC1P51610 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HCFC1P51610 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HCFC1P51610 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 RN7SL606P-201ENST00000472779 293 ntBASIC16.06■□□□□ 0.16
HCFC1P51610 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
HCFC1P51610 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.06■□□□□ 0.16
HCFC1P51610 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.06■□□□□ 0.16
HCFC1P51610 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
HCFC1P51610 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HCFC1P51610 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.06■□□□□ 0.16
HCFC1P51610 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
HCFC1P51610 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 AC093484.2-201ENST00000580996 2166 ntBASIC16.05■□□□□ 0.16
HCFC1P51610 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HCFC1P51610 AL357033.4-201ENST00000617703 1807 ntBASIC16.05■□□□□ 0.16
HCFC1P51610 FEM1AP3-201ENST00000403722 1741 ntBASIC16.05■□□□□ 0.16
HCFC1P51610 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HCFC1P51610 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms