Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CASP1P29466 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CASP1P29466 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CASP1P29466 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CASP1P29466 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.67■□□□□ 0.9
CASP1P29466 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC20.67■□□□□ 0.9
CASP1P29466 AL596275.1-201ENST00000423464 877 ntBASIC20.67■□□□□ 0.9
CASP1P29466 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 CR769767.2-201ENST00000622735 460 ntBASIC20.67■□□□□ 0.9
CASP1P29466 MYC-208ENST00000641036 567 ntBASIC20.67■□□□□ 0.9
CASP1P29466 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.67■□□□□ 0.9
CASP1P29466 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CASP1P29466 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CASP1P29466 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CASP1P29466 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.67■□□□□ 0.9
CASP1P29466 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CASP1P29466 AC007663.1-201ENST00000438948 1240 ntBASIC20.66■□□□□ 0.9
CASP1P29466 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 AC034236.2-201ENST00000606662 1610 ntBASIC20.66■□□□□ 0.9
CASP1P29466 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.66■□□□□ 0.9
CASP1P29466 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CASP1P29466 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC20.66■□□□□ 0.9
CASP1P29466 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CASP1P29466 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CASP1P29466 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.65■□□□□ 0.9
CASP1P29466 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.65■□□□□ 0.9
CASP1P29466 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CASP1P29466 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.65■□□□□ 0.9
CASP1P29466 REXO1L9P-201ENST00000604264 2108 ntBASIC20.65■□□□□ 0.9
CASP1P29466 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.65■□□□□ 0.9
CASP1P29466 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CASP1P29466 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CASP1P29466 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.64■□□□□ 0.9
CASP1P29466 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CASP1P29466 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CASP1P29466 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.64■□□□□ 0.9
CASP1P29466 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
CASP1P29466 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CASP1P29466 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CASP1P29466 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.64■□□□□ 0.89
CASP1P29466 PCDHB18P-201ENST00000524813 2368 ntBASIC20.64■□□□□ 0.89
CASP1P29466 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
CASP1P29466 FZD10-202ENST00000539839 3282 ntBASIC20.64■□□□□ 0.89
CASP1P29466 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
CASP1P29466 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CASP1P29466 KRT17P2-201ENST00000300992 1314 ntBASIC20.64■□□□□ 0.89
CASP1P29466 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.64■□□□□ 0.89
CASP1P29466 SLC25A1P2-201ENST00000430693 912 ntBASIC20.64■□□□□ 0.89
CASP1P29466 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.64■□□□□ 0.89
CASP1P29466 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASP1P29466 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.64■□□□□ 0.89
CASP1P29466 AC010947.1-201ENST00000623454 693 ntBASIC20.64■□□□□ 0.89
CASP1P29466 NOC2LP2-201ENST00000407594 1944 ntBASIC20.64■□□□□ 0.89
CASP1P29466 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CASP1P29466 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.64■□□□□ 0.89
CASP1P29466 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASP1P29466 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASP1P29466 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
CASP1P29466 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
CASP1P29466 AL162741.1-201ENST00000565563 1558 ntBASIC20.63■□□□□ 0.89
CASP1P29466 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASP1P29466 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASP1P29466 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASP1P29466 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASP1P29466 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.63■□□□□ 0.89
CASP1P29466 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CASP1P29466 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
CASP1P29466 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.63■□□□□ 0.89
CASP1P29466 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.63■□□□□ 0.89
CASP1P29466 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASP1P29466 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CASP1P29466 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CASP1P29466 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.63■□□□□ 0.89
CASP1P29466 AC093827.2-201ENST00000512654 315 ntBASIC20.63■□□□□ 0.89
CASP1P29466 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms