Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
COL5A2P05997 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
COL5A2P05997 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC24.27■■□□□ 1.48
COL5A2P05997 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 RAB17-203ENST00000409576 466 ntTSL 3 BASIC24.26■■□□□ 1.47
COL5A2P05997 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC24.26■■□□□ 1.47
COL5A2P05997 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC24.26■■□□□ 1.47
COL5A2P05997 RNA5SP415-201ENST00000517246 115 ntBASIC24.26■■□□□ 1.47
COL5A2P05997 OR7E14P-202ENST00000530490 1290 ntBASIC24.26■■□□□ 1.47
COL5A2P05997 AC008687.5-201ENST00000593746 558 ntBASIC24.26■■□□□ 1.47
COL5A2P05997 AC008735.5-201ENST00000623544 497 ntBASIC24.26■■□□□ 1.47
COL5A2P05997 AL139288.1-201ENST00000623748 933 ntBASIC24.26■■□□□ 1.47
COL5A2P05997 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC24.26■■□□□ 1.47
COL5A2P05997 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.26■■□□□ 1.47
COL5A2P05997 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC24.26■■□□□ 1.47
COL5A2P05997 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
COL5A2P05997 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC24.26■■□□□ 1.47
COL5A2P05997 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
COL5A2P05997 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC24.26■■□□□ 1.47
COL5A2P05997 COX5A-204ENST00000567270 579 ntTSL 3 BASIC24.26■■□□□ 1.47
COL5A2P05997 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC24.26■■□□□ 1.47
COL5A2P05997 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
COL5A2P05997 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC24.25■■□□□ 1.47
COL5A2P05997 AC009102.3-201ENST00000623118 1491 ntBASIC24.25■■□□□ 1.47
COL5A2P05997 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC24.25■■□□□ 1.47
COL5A2P05997 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL5A2P05997 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC24.25■■□□□ 1.47
COL5A2P05997 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL5A2P05997 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL5A2P05997 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL5A2P05997 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
COL5A2P05997 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC24.25■■□□□ 1.47
COL5A2P05997 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL5A2P05997 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC24.24■■□□□ 1.47
COL5A2P05997 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL5A2P05997 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC24.24■■□□□ 1.47
COL5A2P05997 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL5A2P05997 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
COL5A2P05997 ASL-204ENST00000395331 1538 ntTSL 5 BASIC24.24■■□□□ 1.47
COL5A2P05997 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL5A2P05997 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL5A2P05997 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL5A2P05997 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
COL5A2P05997 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
COL5A2P05997 AC009154.2-201ENST00000621177 724 ntBASIC24.24■■□□□ 1.47
COL5A2P05997 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC24.24■■□□□ 1.47
COL5A2P05997 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
COL5A2P05997 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC24.24■■□□□ 1.47
COL5A2P05997 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC24.23■■□□□ 1.47
COL5A2P05997 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC24.23■■□□□ 1.47
COL5A2P05997 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC24.23■■□□□ 1.47
COL5A2P05997 AC004967.1-201ENST00000453589 447 ntBASIC24.23■■□□□ 1.47
COL5A2P05997 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC24.23■■□□□ 1.47
COL5A2P05997 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.23■■□□□ 1.47
COL5A2P05997 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC24.23■■□□□ 1.47
COL5A2P05997 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC24.23■■□□□ 1.47
COL5A2P05997 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC24.23■■□□□ 1.47
COL5A2P05997 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC24.23■■□□□ 1.47
COL5A2P05997 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC24.23■■□□□ 1.47
COL5A2P05997 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
COL5A2P05997 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC24.22■■□□□ 1.47
COL5A2P05997 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 AL356309.3-201ENST00000624132 1934 ntBASIC24.22■■□□□ 1.47
COL5A2P05997 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC24.22■■□□□ 1.47
COL5A2P05997 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC24.22■■□□□ 1.47
COL5A2P05997 FUOM-202ENST00000368551 628 ntTSL 3 BASIC24.22■■□□□ 1.47
COL5A2P05997 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
COL5A2P05997 MTCL1P1-201ENST00000446207 792 ntBASIC24.22■■□□□ 1.47
COL5A2P05997 KRT18P3-201ENST00000451602 1288 ntBASIC24.22■■□□□ 1.47
COL5A2P05997 AC040169.1-201ENST00000565382 521 ntBASIC24.22■■□□□ 1.47
COL5A2P05997 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC24.22■■□□□ 1.47
COL5A2P05997 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC24.22■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms