Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 AL032819.2-201ENST00000624543 2162 ntBASIC20.4■□□□□ 0.86
CD4P01730 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CD4P01730 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD4P01730 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD4P01730 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
CD4P01730 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD4P01730 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.39■□□□□ 0.86
CD4P01730 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD4P01730 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD4P01730 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CD4P01730 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CD4P01730 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD4P01730 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD4P01730 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD4P01730 KRT18P13-201ENST00000400056 1290 ntBASIC20.39■□□□□ 0.85
CD4P01730 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD4P01730 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.39■□□□□ 0.85
CD4P01730 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.39■□□□□ 0.85
CD4P01730 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.39■□□□□ 0.85
CD4P01730 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CD4P01730 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.39■□□□□ 0.85
CD4P01730 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.39■□□□□ 0.85
CD4P01730 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CD4P01730 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD4P01730 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
CD4P01730 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.39■□□□□ 0.85
CD4P01730 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CD4P01730 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD4P01730 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CD4P01730 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CD4P01730 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CD4P01730 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.38■□□□□ 0.85
CD4P01730 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CD4P01730 FP475955.4-201ENST00000623131 1990 ntBASIC20.38■□□□□ 0.85
CD4P01730 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.38■□□□□ 0.85
CD4P01730 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
CD4P01730 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC20.38■□□□□ 0.85
CD4P01730 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 MINOS1P3-201ENST00000457048 203 ntBASIC20.38■□□□□ 0.85
CD4P01730 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.38■□□□□ 0.85
CD4P01730 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.38■□□□□ 0.85
CD4P01730 AC011840.4-201ENST00000578471 627 ntBASIC20.38■□□□□ 0.85
CD4P01730 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 IRX1P1-201ENST00000438849 1838 ntBASIC20.38■□□□□ 0.85
CD4P01730 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.38■□□□□ 0.85
CD4P01730 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CD4P01730 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CD4P01730 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.38■□□□□ 0.85
CD4P01730 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CD4P01730 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.38■□□□□ 0.85
CD4P01730 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.38■□□□□ 0.85
CD4P01730 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
CD4P01730 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.37■□□□□ 0.85
CD4P01730 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 AL031284.1-201ENST00000419297 478 ntBASIC20.37■□□□□ 0.85
CD4P01730 KRT18P67-201ENST00000432816 1264 ntBASIC20.37■□□□□ 0.85
CD4P01730 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.37■□□□□ 0.85
CD4P01730 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.37■□□□□ 0.85
CD4P01730 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.37■□□□□ 0.85
CD4P01730 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.37■□□□□ 0.85
CD4P01730 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 BNIP3P18-201ENST00000593976 575 ntBASIC20.37■□□□□ 0.85
CD4P01730 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
CD4P01730 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CD4P01730 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.37■□□□□ 0.85
CD4P01730 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD4P01730 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD4P01730 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.36■□□□□ 0.85
CD4P01730 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CD4P01730 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD4P01730 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD4P01730 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CD4P01730 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CD4P01730 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CD4P01730 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.36■□□□□ 0.85
CD4P01730 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms