Protein–RNA interactions for Protein: O96018

APBA3, Amyloid-beta A4 precursor protein-binding family A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3O96018 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
APBA3O96018 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
APBA3O96018 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
APBA3O96018 AC002310.6-201ENST00000624451 1377 ntBASIC23.56■■□□□ 1.36
APBA3O96018 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
APBA3O96018 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
APBA3O96018 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
APBA3O96018 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC23.56■■□□□ 1.36
APBA3O96018 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC23.56■■□□□ 1.36
APBA3O96018 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC23.56■■□□□ 1.36
APBA3O96018 AC108751.1-201ENST00000490852 363 ntBASIC23.56■■□□□ 1.36
APBA3O96018 AC113404.2-201ENST00000507884 177 ntBASIC23.56■■□□□ 1.36
APBA3O96018 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
APBA3O96018 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC23.56■■□□□ 1.36
APBA3O96018 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC23.56■■□□□ 1.36
APBA3O96018 GREM1-201ENST00000560677 623 ntTSL 4 BASIC23.56■■□□□ 1.36
APBA3O96018 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.56■■□□□ 1.36
APBA3O96018 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.56■■□□□ 1.36
APBA3O96018 AC093028.1-201ENST00000622998 982 ntBASIC23.56■■□□□ 1.36
APBA3O96018 AC005593.1-201ENST00000624894 515 ntBASIC23.56■■□□□ 1.36
APBA3O96018 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC23.56■■□□□ 1.36
APBA3O96018 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
APBA3O96018 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC23.56■■□□□ 1.36
APBA3O96018 Z82202.1-201ENST00000623446 1880 ntBASIC23.56■■□□□ 1.36
APBA3O96018 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
APBA3O96018 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
APBA3O96018 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC23.55■■□□□ 1.36
APBA3O96018 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
APBA3O96018 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APBA3O96018 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
APBA3O96018 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
APBA3O96018 SOD2-201ENST00000337404 991 ntTSL 2 BASIC23.55■■□□□ 1.36
APBA3O96018 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
APBA3O96018 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC23.55■■□□□ 1.36
APBA3O96018 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
APBA3O96018 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.55■■□□□ 1.36
APBA3O96018 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC23.55■■□□□ 1.36
APBA3O96018 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC23.55■■□□□ 1.36
APBA3O96018 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
APBA3O96018 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC23.55■■□□□ 1.36
APBA3O96018 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC23.55■■□□□ 1.36
APBA3O96018 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC23.55■■□□□ 1.36
APBA3O96018 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APBA3O96018 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC23.55■■□□□ 1.36
APBA3O96018 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
APBA3O96018 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.55■■□□□ 1.36
APBA3O96018 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.54■■□□□ 1.36
APBA3O96018 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
APBA3O96018 KRT8P50-201ENST00000562022 1438 ntBASIC23.54■■□□□ 1.36
APBA3O96018 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
APBA3O96018 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
APBA3O96018 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC23.54■■□□□ 1.36
APBA3O96018 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC23.54■■□□□ 1.36
APBA3O96018 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.54■■□□□ 1.36
APBA3O96018 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC23.54■■□□□ 1.36
APBA3O96018 PUDP-206ENST00000540122 825 ntTSL 2 BASIC23.54■■□□□ 1.36
APBA3O96018 AC138761.1-201ENST00000584393 385 ntBASIC23.54■■□□□ 1.36
APBA3O96018 CYGB-205ENST00000590175 830 ntTSL 3 BASIC23.54■■□□□ 1.36
APBA3O96018 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC23.54■■□□□ 1.36
APBA3O96018 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
APBA3O96018 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
APBA3O96018 TEX21P-204ENST00000641479 1693 ntBASIC23.54■■□□□ 1.36
APBA3O96018 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
APBA3O96018 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
APBA3O96018 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 AC073314.1-201ENST00000568729 2216 ntBASIC23.53■■□□□ 1.36
APBA3O96018 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.53■■□□□ 1.36
APBA3O96018 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
APBA3O96018 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC23.53■■□□□ 1.36
APBA3O96018 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC23.53■■□□□ 1.36
APBA3O96018 MTCL1P1-201ENST00000446207 792 ntBASIC23.53■■□□□ 1.36
APBA3O96018 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC23.53■■□□□ 1.36
APBA3O96018 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC23.53■■□□□ 1.36
APBA3O96018 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC23.53■■□□□ 1.36
APBA3O96018 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.53■■□□□ 1.36
APBA3O96018 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
APBA3O96018 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
APBA3O96018 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
APBA3O96018 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
APBA3O96018 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC23.52■■□□□ 1.36
APBA3O96018 CEND1P1-201ENST00000451006 455 ntBASIC23.52■■□□□ 1.36
APBA3O96018 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.52■■□□□ 1.36
APBA3O96018 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.52■■□□□ 1.36
APBA3O96018 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC23.52■■□□□ 1.36
APBA3O96018 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC23.52■■□□□ 1.36
APBA3O96018 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
APBA3O96018 AC027612.4-201ENST00000605371 583 ntBASIC23.52■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms