Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.2■□□□□ 0.98
MBD3O95983 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.2■□□□□ 0.98
MBD3O95983 PRSS44-201ENST00000515154 1146 ntBASIC21.2■□□□□ 0.98
MBD3O95983 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
MBD3O95983 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.2■□□□□ 0.98
MBD3O95983 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC21.2■□□□□ 0.98
MBD3O95983 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
MBD3O95983 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.2■□□□□ 0.98
MBD3O95983 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MBD3O95983 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
MBD3O95983 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
MBD3O95983 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC21.19■□□□□ 0.98
MBD3O95983 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
MBD3O95983 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
MBD3O95983 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.19■□□□□ 0.98
MBD3O95983 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
MBD3O95983 MYC-209ENST00000641252 345 ntBASIC21.19■□□□□ 0.98
MBD3O95983 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC21.19■□□□□ 0.98
MBD3O95983 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.19■□□□□ 0.98
MBD3O95983 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.19■□□□□ 0.98
MBD3O95983 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.19■□□□□ 0.98
MBD3O95983 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 AC006116.8-202ENST00000587620 1550 ntBASIC21.19■□□□□ 0.98
MBD3O95983 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MBD3O95983 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
MBD3O95983 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.18■□□□□ 0.98
MBD3O95983 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC21.18■□□□□ 0.98
MBD3O95983 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC21.18■□□□□ 0.98
MBD3O95983 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.18■□□□□ 0.98
MBD3O95983 AC080038.1-201ENST00000611274 1154 ntBASIC21.18■□□□□ 0.98
MBD3O95983 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.18■□□□□ 0.98
MBD3O95983 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC21.18■□□□□ 0.98
MBD3O95983 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
MBD3O95983 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
MBD3O95983 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.18■□□□□ 0.98
MBD3O95983 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.18■□□□□ 0.98
MBD3O95983 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 AC097658.1-201ENST00000475555 843 ntBASIC21.17■□□□□ 0.98
MBD3O95983 PRKY-204ENST00000533551 1019 ntBASIC21.17■□□□□ 0.98
MBD3O95983 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.17■□□□□ 0.98
MBD3O95983 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 AC004264.1-201ENST00000608354 794 ntBASIC21.17■□□□□ 0.98
MBD3O95983 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.17■□□□□ 0.98
MBD3O95983 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.17■□□□□ 0.98
MBD3O95983 NBPF21P-201ENST00000425093 1451 ntBASIC21.17■□□□□ 0.98
MBD3O95983 RCC2P3-201ENST00000418112 1537 ntBASIC21.17■□□□□ 0.98
MBD3O95983 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MBD3O95983 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MBD3O95983 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms