Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
HDAC3O15379 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HDAC3O15379 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.01■□□□□ 0.47
HDAC3O15379 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC3O15379 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HDAC3O15379 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC3O15379 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HDAC3O15379 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
HDAC3O15379 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC3O15379 AC004980.1-204ENST00000429707 299 ntBASIC18.01■□□□□ 0.47
HDAC3O15379 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC18.01■□□□□ 0.47
HDAC3O15379 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC3O15379 AC069544.1-201ENST00000609399 999 ntBASIC18.01■□□□□ 0.47
HDAC3O15379 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
HDAC3O15379 GXYLT1P5-201ENST00000614548 1189 ntBASIC18.01■□□□□ 0.47
HDAC3O15379 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.01■□□□□ 0.47
HDAC3O15379 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HDAC3O15379 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HDAC3O15379 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC3O15379 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.01■□□□□ 0.47
HDAC3O15379 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.01■□□□□ 0.47
HDAC3O15379 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HDAC3O15379 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HDAC3O15379 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.01■□□□□ 0.47
HDAC3O15379 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 PRORSD1P-202ENST00000563365 2154 ntBASIC18■□□□□ 0.47
HDAC3O15379 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18■□□□□ 0.47
HDAC3O15379 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18■□□□□ 0.47
HDAC3O15379 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18■□□□□ 0.47
HDAC3O15379 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18■□□□□ 0.47
HDAC3O15379 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18■□□□□ 0.47
HDAC3O15379 KRT17P3-201ENST00000420566 1262 ntBASIC18■□□□□ 0.47
HDAC3O15379 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18■□□□□ 0.47
HDAC3O15379 AC091390.4-202ENST00000476426 537 ntBASIC18■□□□□ 0.47
HDAC3O15379 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18■□□□□ 0.47
HDAC3O15379 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18■□□□□ 0.47
HDAC3O15379 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18■□□□□ 0.47
HDAC3O15379 AC142086.2-201ENST00000569753 217 ntBASIC18■□□□□ 0.47
HDAC3O15379 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18■□□□□ 0.47
HDAC3O15379 AL109923.1-201ENST00000618799 583 ntBASIC18■□□□□ 0.47
HDAC3O15379 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HDAC3O15379 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18■□□□□ 0.47
HDAC3O15379 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HDAC3O15379 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18■□□□□ 0.47
HDAC3O15379 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.99■□□□□ 0.47
HDAC3O15379 AL109659.2-201ENST00000606809 1674 ntBASIC17.99■□□□□ 0.47
HDAC3O15379 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.99■□□□□ 0.47
HDAC3O15379 SIRPAP1-201ENST00000448467 1770 ntBASIC17.99■□□□□ 0.47
HDAC3O15379 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.99■□□□□ 0.47
HDAC3O15379 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HDAC3O15379 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
HDAC3O15379 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.99■□□□□ 0.47
HDAC3O15379 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.99■□□□□ 0.47
HDAC3O15379 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.99■□□□□ 0.47
HDAC3O15379 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.99■□□□□ 0.47
HDAC3O15379 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.99■□□□□ 0.47
HDAC3O15379 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.99■□□□□ 0.47
HDAC3O15379 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HDAC3O15379 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
HDAC3O15379 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HDAC3O15379 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.99■□□□□ 0.47
HDAC3O15379 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms