Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.78■□□□□ 0.76
SMIM28A0A1B0GU29 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 KRT18P1-202ENST00000452408 1331 ntBASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 DUSP5P1-201ENST00000441325 1139 ntBASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SMIM28A0A1B0GU29 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMIM28A0A1B0GU29 AC005082.1-201ENST00000413042 2259 ntBASIC19.77■□□□□ 0.75
SMIM28A0A1B0GU29 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SMIM28A0A1B0GU29 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 CROCCP3-202ENST00000420820 1947 ntBASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SMIM28A0A1B0GU29 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 AL353692.3-201ENST00000407031 1396 ntBASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 KRT126P-201ENST00000549467 1181 ntBASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 AC090616.6-201ENST00000582640 721 ntBASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 AL024508.2-201ENST00000607749 1894 ntBASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 AP000974.1-201ENST00000623909 2387 ntBASIC19.75■□□□□ 0.75
SMIM28A0A1B0GU29 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 AC120498.9-201ENST00000339021 3867 ntBASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SMIM28A0A1B0GU29 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms