Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.41□□□□□ -0.26
TRAV26-1A0A087WT03 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 TEX21P-204ENST00000641479 1693 ntBASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 CICP6-201ENST00000457191 2729 ntBASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 AL390955.1-201ENST00000428694 934 ntBASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 MFAP1P1-201ENST00000442257 1255 ntBASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 PRSS44-201ENST00000515154 1146 ntBASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 BX088651.1-201ENST00000540551 451 ntBASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 AC079598.2-202ENST00000546624 1451 ntBASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
TRAV26-1A0A087WT03 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC13.4□□□□□ -0.27
TRAV26-1A0A087WT03 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
TRAV26-1A0A087WT03 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 KRT8P11-201ENST00000409686 1436 ntBASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 AC141586.3-201ENST00000562166 1838 ntBASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 AC084018.2-201ENST00000613093 2607 ntBASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 TSPY23P-201ENST00000440136 739 ntBASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 FDX2-206ENST00000492239 773 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAV26-1A0A087WT03 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms