Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SCN10AQ9Y5Y9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 AL049812.1-201ENST00000432563 2267 ntBASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 AF186996.4-201ENST00000467186 377 ntBASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 KRT18P58-201ENST00000527480 1120 ntBASIC20.23■□□□□ 0.83
SCN10AQ9Y5Y9 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.22■□□□□ 0.83
SCN10AQ9Y5Y9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 AC145285.3-201ENST00000564603 959 ntBASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 AL355877.3-201ENST00000622820 899 ntBASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 SDHAP2-201ENST00000455183 2001 ntBASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 AC112777.1-201ENST00000540175 1423 ntBASIC20.21■□□□□ 0.83
SCN10AQ9Y5Y9 AC007952.6-201ENST00000573168 2673 ntBASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 AC003957.1-201ENST00000625108 2673 ntBASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 AC009102.3-201ENST00000623118 1491 ntBASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.2■□□□□ 0.82
SCN10AQ9Y5Y9 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms