Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 AC005082.1-201ENST00000413042 2259 ntBASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CUEDC1Q9NWM3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 AC099343.3-201ENST00000605834 2503 ntBASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 AL023973.1-201ENST00000624619 620 ntBASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 KRT8P50-201ENST00000562022 1438 ntBASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.88■□□□□ 0.45
CUEDC1Q9NWM3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 KRT18P41-201ENST00000518924 1277 ntBASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 AC024243.1-201ENST00000609234 778 ntBASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 AC112497.1-201ENST00000624824 639 ntBASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CUEDC1Q9NWM3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 NEK4P2-201ENST00000580004 1012 ntBASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.86■□□□□ 0.45
CUEDC1Q9NWM3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms