Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 MIR149-201ENST00000384879 89 ntBASIC18.46■□□□□ 0.55
TREX1Q9NSU2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 FAM87A-204ENST00000613235 858 ntBASIC18.46■□□□□ 0.55
TREX1Q9NSU2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TREX1Q9NSU2 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TREX1Q9NSU2 AC009102.3-201ENST00000623118 1491 ntBASIC18.46■□□□□ 0.54
TREX1Q9NSU2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 NOC2LP2-201ENST00000407594 1944 ntBASIC18.45■□□□□ 0.54
TREX1Q9NSU2 AC099343.3-201ENST00000605834 2503 ntBASIC18.45■□□□□ 0.54
TREX1Q9NSU2 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 AC128688.1-201ENST00000487626 519 ntBASIC18.45■□□□□ 0.54
TREX1Q9NSU2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 AC066615.1-201ENST00000640911 628 ntBASIC18.45■□□□□ 0.54
TREX1Q9NSU2 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 GMCL1P1-201ENST00000463439 1581 ntBASIC18.45■□□□□ 0.54
TREX1Q9NSU2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.45■□□□□ 0.54
TREX1Q9NSU2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 AC104390.1-201ENST00000555663 520 ntBASIC18.44■□□□□ 0.54
TREX1Q9NSU2 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 AC112497.1-201ENST00000624824 639 ntBASIC18.44■□□□□ 0.54
TREX1Q9NSU2 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TREX1Q9NSU2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.43■□□□□ 0.54
TREX1Q9NSU2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms