Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 GPAT2P1-201ENST00000444924 1672 ntBASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 AC008622.2-201ENST00000617006 1229 ntBASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NEUROD4Q9HD90 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 AC034236.2-201ENST00000606662 1610 ntBASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 MIR564-202ENST00000385049 94 ntBASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 MIR4785-201ENST00000585005 73 ntBASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 AC007613.1-201ENST00000572811 2597 ntBASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NEUROD4Q9HD90 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 CRYGFP-201ENST00000418459 633 ntBASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 TSPY7P-201ENST00000431358 1114 ntBASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
NEUROD4Q9HD90 AC133561.5-201ENST00000635547 218 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms