Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 AL671277.2-201ENST00000458060 996 ntBASIC21.8■■□□□ 1.08
RNF41Q9H4P4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 AC073592.3-201ENST00000625118 1834 ntBASIC21.8■■□□□ 1.08
RNF41Q9H4P4 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 HYMAI.1-201ENST00000620949 238 ntBASIC21.79■■□□□ 1.08
RNF41Q9H4P4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 AC126763.1-201ENST00000552015 2118 ntBASIC21.79■■□□□ 1.08
RNF41Q9H4P4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RNF41Q9H4P4 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 AL136038.4-201ENST00000603606 1261 ntBASIC21.78■■□□□ 1.08
RNF41Q9H4P4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RNF41Q9H4P4 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 WIZP1-201ENST00000531444 2299 ntBASIC21.77■■□□□ 1.08
RNF41Q9H4P4 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 HBZP1-201ENST00000354915 429 ntBASIC21.77■■□□□ 1.08
RNF41Q9H4P4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 KRT18P35-201ENST00000510488 1269 ntBASIC21.77■■□□□ 1.08
RNF41Q9H4P4 AC087388.1-201ENST00000571370 1112 ntBASIC21.77■■□□□ 1.08
RNF41Q9H4P4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 AC079602.3-201ENST00000623931 403 ntBASIC21.77■■□□□ 1.08
RNF41Q9H4P4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 LINC01311-201ENST00000565162 1445 ntBASIC21.77■■□□□ 1.08
RNF41Q9H4P4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RNF41Q9H4P4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
RNF41Q9H4P4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF41Q9H4P4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF41Q9H4P4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RNF41Q9H4P4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
RNF41Q9H4P4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms