Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 AC096582.2-201ENST00000510860 516 ntBASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 HEIH-201ENST00000623091 1652 ntBASIC22.45■■□□□ 1.18
RTFDC1Q9BY42 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 MIR7706-201ENST00000613747 67 ntBASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 AL355877.3-201ENST00000622820 899 ntBASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTFDC1Q9BY42 AC093484.2-201ENST00000580996 2166 ntBASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 RPL18-209ENST00000550645 463 ntTSL 5 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 AC005336.2-201ENST00000593183 939 ntBASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 AC073130.3-201ENST00000624389 2278 ntBASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 AL032819.2-201ENST00000624543 2162 ntBASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC22.43■■□□□ 1.18
RTFDC1Q9BY42 NFYC-AS1-201ENST00000606277 1687 ntBASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 MTMR9LP-203ENST00000426597 1545 ntBASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 RCN1P2-201ENST00000398357 915 ntBASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 FGFR3P6-201ENST00000457012 610 ntBASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 AC093909.1-201ENST00000504731 1122 ntBASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 AL049840.3-201ENST00000602669 611 ntBASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTFDC1Q9BY42 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.41■■□□□ 1.18
RTFDC1Q9BY42 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms