Protein–RNA interactions for Protein: Q96JQ0

DCHS1, Protocadherin-16, humanhuman

Predictions only

Length 3,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1Q96JQ0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 KRT89P-201ENST00000620027 1478 ntBASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 MTDHP4-201ENST00000600287 670 ntBASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
DCHS1Q96JQ0 AC092720.2-201ENST00000602388 1665 ntBASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 AC084346.2-201ENST00000607097 949 ntBASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.63■□□□□ 0.41
DCHS1Q96JQ0 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 AC093214.1-201ENST00000511688 1107 ntBASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 AC073621.1-201ENST00000392730 636 ntBASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 ELK2BP-201ENST00000415014 1224 ntBASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
DCHS1Q96JQ0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 GPR89P-201ENST00000407924 1495 ntBASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 GRAP-202ENST00000395635 834 ntTSL 2 BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 ABCD1P5-201ENST00000445663 754 ntBASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 LAGE3P1-201ENST00000425356 484 ntBASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 CEND1P1-201ENST00000451006 455 ntBASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 MIR6799-201ENST00000620297 69 ntBASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 AC097374.2-201ENST00000618617 1306 ntBASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
DCHS1Q96JQ0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DCHS1Q96JQ0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms