Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 Z98044.1-201ENST00000632503 1764 ntBASIC15.55■□□□□ 0.08
TIMD4Q96H15 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.55■□□□□ 0.08
TIMD4Q96H15 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 AL136038.4-201ENST00000603606 1261 ntBASIC15.55■□□□□ 0.08
TIMD4Q96H15 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TIMD4Q96H15 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.55■□□□□ 0.08
TIMD4Q96H15 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 AL645929.1-201ENST00000420084 975 ntBASIC15.54■□□□□ 0.08
TIMD4Q96H15 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 AC069148.1-201ENST00000608741 768 ntBASIC15.54■□□□□ 0.08
TIMD4Q96H15 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 HYMAI.1-201ENST00000620949 238 ntBASIC15.54■□□□□ 0.08
TIMD4Q96H15 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 AL357033.4-201ENST00000617703 1807 ntBASIC15.54■□□□□ 0.08
TIMD4Q96H15 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
TIMD4Q96H15 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TIMD4Q96H15 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 AC116407.4-201ENST00000623319 1061 ntBASIC15.53■□□□□ 0.08
TIMD4Q96H15 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TIMD4Q96H15 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC15.53■□□□□ 0.08
TIMD4Q96H15 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms