Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.64■□□□□ 0.58
CHMP6Q96FZ7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP6Q96FZ7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP6Q96FZ7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 AC092666.2-201ENST00000613287 246 ntBASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 FLJ13224-201ENST00000313737 1514 ntBASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP6Q96FZ7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 CROCCP5-201ENST00000436658 830 ntBASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 AC022211.2-201ENST00000585075 2527 ntBASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.63■□□□□ 0.57
CHMP6Q96FZ7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 NKILA-202ENST00000614771 2598 ntBASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 SLC29A4P1-201ENST00000398760 971 ntBASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 TSPY21P-201ENST00000433481 731 ntBASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 AL121832.2-201ENST00000610979 668 ntBASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 MYC-208ENST00000641036 567 ntBASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 MTMR9LP-203ENST00000426597 1545 ntBASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.62■□□□□ 0.57
CHMP6Q96FZ7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms