Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 HLA-L-209ENST00000420110 1011 ntBASIC16.1■□□□□ 0.17
CPNE2Q96FN4 KSR1P1-201ENST00000446298 240 ntBASIC16.1■□□□□ 0.17
CPNE2Q96FN4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 AC068587.9-201ENST00000641814 219 ntBASIC16.1■□□□□ 0.17
CPNE2Q96FN4 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.1■□□□□ 0.17
CPNE2Q96FN4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 KRT8P11-201ENST00000409686 1436 ntBASIC16.1■□□□□ 0.17
CPNE2Q96FN4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 KRT8P32-201ENST00000512863 1461 ntBASIC16.1■□□□□ 0.17
CPNE2Q96FN4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.1■□□□□ 0.17
CPNE2Q96FN4 OR6D1P-203ENST00000641209 4860 ntBASIC16.1■□□□□ 0.17
CPNE2Q96FN4 ABALON-201ENST00000629058 1903 ntBASIC16.09■□□□□ 0.17
CPNE2Q96FN4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CPNE2Q96FN4 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE2Q96FN4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE2Q96FN4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE2Q96FN4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC16.08■□□□□ 0.17
CPNE2Q96FN4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE2Q96FN4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE2Q96FN4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
CPNE2Q96FN4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 AC124016.1-201ENST00000609552 612 ntBASIC16.08■□□□□ 0.16
CPNE2Q96FN4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms