Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM43Q96BQ3 IRX1P1-201ENST00000438849 1838 ntBASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 AC007375.3-201ENST00000600936 2314 ntBASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 AC009533.2-201ENST00000543664 586 ntBASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 AC025062.2-201ENST00000605477 670 ntBASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM43Q96BQ3 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 DNAJB3-202ENST00000449667 1266 ntBASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM43Q96BQ3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 LBH-203ENST00000404397 543 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 AC011467.2-201ENST00000598425 242 ntBASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM43Q96BQ3 AC112907.3-201ENST00000577781 2400 ntBASIC20.02■□□□□ 0.79
TRIM43Q96BQ3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.79
TRIM43Q96BQ3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.02■□□□□ 0.79
TRIM43Q96BQ3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM43Q96BQ3 AL163051.1-201ENST00000569214 1512 ntBASIC20.02■□□□□ 0.79
TRIM43Q96BQ3 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 AC004832.2-201ENST00000426397 482 ntBASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 ABCD1P5-201ENST00000445663 754 ntBASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 AC113404.2-201ENST00000507884 177 ntBASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 UNC93B6-202ENST00000528242 690 ntBASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 AL138831.2-201ENST00000606564 490 ntBASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 AC008735.5-201ENST00000623544 497 ntBASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 AL356309.3-201ENST00000624132 1934 ntBASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM43Q96BQ3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC20■□□□□ 0.79
TRIM43Q96BQ3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM43Q96BQ3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms