Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTF1Q92541 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC24.12■■□□□ 1.45
RTF1Q92541 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC24.12■■□□□ 1.45
RTF1Q92541 AC005332.3-201ENST00000589904 676 ntBASIC24.12■■□□□ 1.45
RTF1Q92541 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC24.12■■□□□ 1.45
RTF1Q92541 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTF1Q92541 Z83836.1-201ENST00000624605 1642 ntBASIC24.12■■□□□ 1.45
RTF1Q92541 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.12■■□□□ 1.45
RTF1Q92541 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC24.12■■□□□ 1.45
RTF1Q92541 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RTF1Q92541 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RTF1Q92541 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC24.12■■□□□ 1.45
RTF1Q92541 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTF1Q92541 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RTF1Q92541 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC24.11■■□□□ 1.45
RTF1Q92541 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 BAALC-202ENST00000306391 243 ntTSL 5 BASIC24.11■■□□□ 1.45
RTF1Q92541 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
RTF1Q92541 BAALC-204ENST00000330955 222 ntTSL 5 BASIC24.11■■□□□ 1.45
RTF1Q92541 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC24.11■■□□□ 1.45
RTF1Q92541 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
RTF1Q92541 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
RTF1Q92541 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RTF1Q92541 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
RTF1Q92541 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RTF1Q92541 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC24.1■■□□□ 1.45
RTF1Q92541 AC112777.1-201ENST00000540175 1423 ntBASIC24.1■■□□□ 1.45
RTF1Q92541 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 IPPK-202ENST00000375522 882 ntTSL 3 BASIC24.1■■□□□ 1.45
RTF1Q92541 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC24.1■■□□□ 1.45
RTF1Q92541 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC24.1■■□□□ 1.45
RTF1Q92541 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC24.1■■□□□ 1.45
RTF1Q92541 AC092329.2-201ENST00000598402 547 ntBASIC24.1■■□□□ 1.45
RTF1Q92541 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
RTF1Q92541 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC24.1■■□□□ 1.45
RTF1Q92541 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
RTF1Q92541 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
RTF1Q92541 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
RTF1Q92541 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
RTF1Q92541 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.1■■□□□ 1.45
RTF1Q92541 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RTF1Q92541 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RTF1Q92541 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 MYLKP1-201ENST00000509077 1580 ntBASIC24.09■■□□□ 1.45
RTF1Q92541 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
RTF1Q92541 CHCHD2P8-201ENST00000429873 447 ntBASIC24.09■■□□□ 1.45
RTF1Q92541 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC24.09■■□□□ 1.45
RTF1Q92541 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.09■■□□□ 1.45
RTF1Q92541 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC24.09■■□□□ 1.45
RTF1Q92541 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC24.09■■□□□ 1.45
RTF1Q92541 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC24.09■■□□□ 1.45
RTF1Q92541 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC24.09■■□□□ 1.45
RTF1Q92541 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RTF1Q92541 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
RTF1Q92541 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.09■■□□□ 1.45
RTF1Q92541 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
RTF1Q92541 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
RTF1Q92541 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTF1Q92541 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
RTF1Q92541 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC24.08■■□□□ 1.45
RTF1Q92541 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTF1Q92541 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
RTF1Q92541 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTF1Q92541 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTF1Q92541 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTF1Q92541 MIR149-201ENST00000384879 89 ntBASIC24.08■■□□□ 1.45
RTF1Q92541 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
RTF1Q92541 AP002383.4-201ENST00000442518 975 ntBASIC24.08■■□□□ 1.45
RTF1Q92541 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC24.08■■□□□ 1.45
RTF1Q92541 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms