Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX1Q92499 HOXB1-202ENST00000577092 1414 ntBASIC19.72■□□□□ 0.75
DDX1Q92499 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
DDX1Q92499 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.72■□□□□ 0.75
DDX1Q92499 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
DDX1Q92499 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
DDX1Q92499 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX1Q92499 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX1Q92499 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX1Q92499 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
DDX1Q92499 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
DDX1Q92499 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DDX1Q92499 AC135776.1-201ENST00000319817 2481 ntBASIC19.71■□□□□ 0.75
DDX1Q92499 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX1Q92499 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX1Q92499 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
DDX1Q92499 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
DDX1Q92499 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX1Q92499 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
DDX1Q92499 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
DDX1Q92499 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX1Q92499 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.71■□□□□ 0.75
DDX1Q92499 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DDX1Q92499 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
DDX1Q92499 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.71■□□□□ 0.75
DDX1Q92499 ESPNP-201ENST00000270691 2015 ntBASIC19.71■□□□□ 0.75
DDX1Q92499 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
DDX1Q92499 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
DDX1Q92499 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX1Q92499 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX1Q92499 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.71■□□□□ 0.75
DDX1Q92499 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
DDX1Q92499 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
DDX1Q92499 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX1Q92499 ABALON-201ENST00000629058 1903 ntBASIC19.7■□□□□ 0.74
DDX1Q92499 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
DDX1Q92499 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX1Q92499 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.7■□□□□ 0.74
DDX1Q92499 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.7■□□□□ 0.74
DDX1Q92499 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DDX1Q92499 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
DDX1Q92499 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.7■□□□□ 0.74
DDX1Q92499 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 AC093677.2-201ENST00000600169 1863 ntBASIC19.7■□□□□ 0.74
DDX1Q92499 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DDX1Q92499 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.7■□□□□ 0.74
DDX1Q92499 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.7■□□□□ 0.74
DDX1Q92499 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
DDX1Q92499 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
DDX1Q92499 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX1Q92499 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX1Q92499 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX1Q92499 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX1Q92499 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.69■□□□□ 0.74
DDX1Q92499 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX1Q92499 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX1Q92499 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
DDX1Q92499 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.69■□□□□ 0.74
DDX1Q92499 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.69■□□□□ 0.74
DDX1Q92499 FAM87A-204ENST00000613235 858 ntBASIC19.69■□□□□ 0.74
DDX1Q92499 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DDX1Q92499 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
DDX1Q92499 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.69■□□□□ 0.74
DDX1Q92499 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DDX1Q92499 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
DDX1Q92499 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.68■□□□□ 0.74
DDX1Q92499 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DDX1Q92499 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms