Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT1Q8NF37 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT1Q8NF37 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
LPCAT1Q8NF37 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LPCAT1Q8NF37 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 KRT8P7-201ENST00000533003 1432 ntBASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 AP000593.1-201ENST00000393668 712 ntBASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 TMPOP1-202ENST00000424642 1267 ntBASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 MYLKP1-201ENST00000509077 1580 ntBASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 AC099343.3-201ENST00000605834 2503 ntBASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 BCL2-203ENST00000589955 5011 ntBASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LPCAT1Q8NF37 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 AC117947.1-201ENST00000427448 529 ntBASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 SEC1P-202ENST00000473944 940 ntBASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 GCSHP2-201ENST00000560971 527 ntBASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 AC006011.2-201ENST00000621313 1158 ntBASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
LPCAT1Q8NF37 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.64■□□□□ 0.58
LPCAT1Q8NF37 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LPCAT1Q8NF37 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms