Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 AC112777.1-201ENST00000540175 1423 ntBASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.4■□□□□ 0.38
COL27A1Q8IZC6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 SART3-203ENST00000546611 1184 ntBASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 AL591684.3-201ENST00000605187 298 ntBASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 AC117500.6-201ENST00000624871 588 ntBASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
COL27A1Q8IZC6 AL049812.1-201ENST00000432563 2267 ntBASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 AL161938.1-201ENST00000569833 2180 ntBASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 AC012640.2-201ENST00000561606 901 ntBASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.39■□□□□ 0.37
COL27A1Q8IZC6 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 RBM17P3-201ENST00000417687 1192 ntBASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 AC064862.7-201ENST00000604520 867 ntBASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 AL032819.2-201ENST00000624543 2162 ntBASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
COL27A1Q8IZC6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 SDHAP2-201ENST00000455183 2001 ntBASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 AC034105.1-201ENST00000563488 319 ntBASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 MIR5100-201ENST00000579544 119 ntBASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
COL27A1Q8IZC6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms