Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 MINOS1P3-201ENST00000457048 203 ntBASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 AL049812.1-201ENST00000432563 2267 ntBASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 AC012640.2-201ENST00000561606 901 ntBASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 AC073130.3-201ENST00000624389 2278 ntBASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
VPS13BQ7Z7G8 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 MTMR9LP-203ENST00000426597 1545 ntBASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AC008608.2-201ENST00000606089 416 ntBASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AF186996.4-201ENST00000467186 377 ntBASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AL355877.3-201ENST00000622820 899 ntBASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AC006333.2-201ENST00000607957 2099 ntBASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AC024563.2-201ENST00000603282 481 ntBASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 AC124864.1-201ENST00000623408 392 ntBASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
VPS13BQ7Z7G8 KRT8P32-201ENST00000512863 1461 ntBASIC11.4□□□□□ -0.59
VPS13BQ7Z7G8 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
VPS13BQ7Z7G8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC11.4□□□□□ -0.59
VPS13BQ7Z7G8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
VPS13BQ7Z7G8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 IMP4-203ENST00000409935 958 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC211486.1-202ENST00000416371 468 ntBASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC211476.1-201ENST00000503899 468 ntBASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 FAM197Y3-203ENST00000618346 717 ntBASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 RCC2P3-201ENST00000418112 1537 ntBASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC11.39□□□□□ -0.59
VPS13BQ7Z7G8 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms