Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP13P45452 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MMP13P45452 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MMP13P45452 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
MMP13P45452 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MMP13P45452 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP13P45452 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP13P45452 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MMP13P45452 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP13P45452 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
MMP13P45452 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP13P45452 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
MMP13P45452 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP13P45452 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP13P45452 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MMP13P45452 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP13P45452 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP13P45452 KRT8P3-201ENST00000519669 1449 ntBASIC19.25■□□□□ 0.67
MMP13P45452 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MMP13P45452 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP13P45452 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
MMP13P45452 AL162741.1-201ENST00000565563 1558 ntBASIC19.25■□□□□ 0.67
MMP13P45452 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP13P45452 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP13P45452 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
MMP13P45452 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
MMP13P45452 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MMP13P45452 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MMP13P45452 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP13P45452 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MMP13P45452 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP13P45452 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 AC139713.2-201ENST00000641328 2723 ntBASIC19.24■□□□□ 0.67
MMP13P45452 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP13P45452 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP13P45452 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MMP13P45452 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP13P45452 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.24■□□□□ 0.67
MMP13P45452 CA15P1-201ENST00000481698 905 ntBASIC19.24■□□□□ 0.67
MMP13P45452 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP13P45452 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP13P45452 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.24■□□□□ 0.67
MMP13P45452 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP13P45452 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP13P45452 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MMP13P45452 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.24■□□□□ 0.67
MMP13P45452 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MMP13P45452 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MMP13P45452 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP13P45452 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP13P45452 ESPNP-201ENST00000270691 2015 ntBASIC19.24■□□□□ 0.67
MMP13P45452 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
MMP13P45452 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP13P45452 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP13P45452 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
MMP13P45452 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.23■□□□□ 0.67
MMP13P45452 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP13P45452 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 MMP23A-201ENST00000234610 1017 ntBASIC19.23■□□□□ 0.67
MMP13P45452 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.23■□□□□ 0.67
MMP13P45452 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.23■□□□□ 0.67
MMP13P45452 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MMP13P45452 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms