Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
ATP6V1AP38606 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V1AP38606 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V1AP38606 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V1AP38606 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V1AP38606 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.54■■□□□ 1.36
ATP6V1AP38606 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V1AP38606 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V1AP38606 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V1AP38606 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
ATP6V1AP38606 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
ATP6V1AP38606 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V1AP38606 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V1AP38606 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V1AP38606 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 CCS-201ENST00000310190 942 ntTSL 5 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V1AP38606 HNRNPDP1-201ENST00000439535 754 ntBASIC23.53■■□□□ 1.36
ATP6V1AP38606 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 FGFR3P6-201ENST00000457012 610 ntBASIC23.53■■□□□ 1.36
ATP6V1AP38606 AC073648.2-201ENST00000510116 352 ntBASIC23.53■■□□□ 1.36
ATP6V1AP38606 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 AC005336.2-201ENST00000593183 939 ntBASIC23.53■■□□□ 1.36
ATP6V1AP38606 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V1AP38606 FAM215A-202ENST00000632077 792 ntBASIC23.53■■□□□ 1.36
ATP6V1AP38606 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V1AP38606 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V1AP38606 NFYC-AS1-201ENST00000606277 1687 ntBASIC23.53■■□□□ 1.36
ATP6V1AP38606 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
ATP6V1AP38606 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.53■■□□□ 1.36
ATP6V1AP38606 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V1AP38606 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 TP73-AS1-210ENST00000637775 1455 ntBASIC23.52■■□□□ 1.36
ATP6V1AP38606 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V1AP38606 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V1AP38606 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 PIN1-206ENST00000587625 878 ntTSL 2 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V1AP38606 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V1AP38606 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.52■■□□□ 1.36
ATP6V1AP38606 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V1AP38606 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V1AP38606 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
ATP6V1AP38606 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.52■■□□□ 1.35
ATP6V1AP38606 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 MTMR9LP-203ENST00000426597 1545 ntBASIC23.51■■□□□ 1.35
ATP6V1AP38606 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 KRT18P41-201ENST00000518924 1277 ntBASIC23.51■■□□□ 1.35
ATP6V1AP38606 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 MTDHP3-201ENST00000594186 672 ntBASIC23.51■■□□□ 1.35
ATP6V1AP38606 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 ANKRD20A8P-203ENST00000641373 517 ntBASIC23.51■■□□□ 1.35
ATP6V1AP38606 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
ATP6V1AP38606 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
ATP6V1AP38606 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
ATP6V1AP38606 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC23.5■■□□□ 1.35
ATP6V1AP38606 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
ATP6V1AP38606 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms