Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
FOXN1O15353 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC22.08■■□□□ 1.13
FOXN1O15353 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
FOXN1O15353 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
FOXN1O15353 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.08■■□□□ 1.13
FOXN1O15353 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
FOXN1O15353 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
FOXN1O15353 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
FOXN1O15353 AL032819.2-201ENST00000624543 2162 ntBASIC22.08■■□□□ 1.12
FOXN1O15353 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
FOXN1O15353 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXN1O15353 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
FOXN1O15353 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 FAM8A3P-201ENST00000427218 844 ntBASIC22.07■■□□□ 1.12
FOXN1O15353 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC22.07■■□□□ 1.12
FOXN1O15353 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.07■■□□□ 1.12
FOXN1O15353 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXN1O15353 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.07■■□□□ 1.12
FOXN1O15353 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC22.07■■□□□ 1.12
FOXN1O15353 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXN1O15353 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC22.07■■□□□ 1.12
FOXN1O15353 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXN1O15353 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.07■■□□□ 1.12
FOXN1O15353 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.07■■□□□ 1.12
FOXN1O15353 AC134684.3-201ENST00000641758 218 ntBASIC22.07■■□□□ 1.12
FOXN1O15353 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
FOXN1O15353 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXN1O15353 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
FOXN1O15353 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC22.06■■□□□ 1.12
FOXN1O15353 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC22.06■■□□□ 1.12
FOXN1O15353 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.06■■□□□ 1.12
FOXN1O15353 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC22.06■■□□□ 1.12
FOXN1O15353 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
FOXN1O15353 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.06■■□□□ 1.12
FOXN1O15353 IGHV3-47-201ENST00000425060 335 ntBASIC22.06■■□□□ 1.12
FOXN1O15353 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.06■■□□□ 1.12
FOXN1O15353 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
FOXN1O15353 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.06■■□□□ 1.12
FOXN1O15353 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXN1O15353 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
FOXN1O15353 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.05■■□□□ 1.12
FOXN1O15353 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
FOXN1O15353 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.05■■□□□ 1.12
FOXN1O15353 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.05■■□□□ 1.12
FOXN1O15353 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
FOXN1O15353 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC22.05■■□□□ 1.12
FOXN1O15353 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC22.05■■□□□ 1.12
FOXN1O15353 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.05■■□□□ 1.12
FOXN1O15353 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.05■■□□□ 1.12
FOXN1O15353 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 KRT8P41-201ENST00000533985 1514 ntBASIC22.05■■□□□ 1.12
FOXN1O15353 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
FOXN1O15353 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC22.04■■□□□ 1.12
FOXN1O15353 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
FOXN1O15353 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.04■■□□□ 1.12
FOXN1O15353 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.04■■□□□ 1.12
FOXN1O15353 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
FOXN1O15353 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
FOXN1O15353 CYMP-203ENST00000474680 1263 ntBASIC22.04■■□□□ 1.12
FOXN1O15353 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22.04■■□□□ 1.12
FOXN1O15353 Z69720.1-201ENST00000601483 472 ntBASIC22.04■■□□□ 1.12
FOXN1O15353 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms