Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 AL163051.1-201ENST00000569214 1512 ntBASIC21.19■□□□□ 0.98
ATP2A1O14983 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
ATP2A1O14983 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
ATP2A1O14983 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A1O14983 AC004870.1-201ENST00000315132 882 ntBASIC21.18■□□□□ 0.98
ATP2A1O14983 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
ATP2A1O14983 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.18■□□□□ 0.98
ATP2A1O14983 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.18■□□□□ 0.98
ATP2A1O14983 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
ATP2A1O14983 IGHV3-41-201ENST00000613121 348 ntBASIC21.18■□□□□ 0.98
ATP2A1O14983 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC21.18■□□□□ 0.98
ATP2A1O14983 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.18■□□□□ 0.98
ATP2A1O14983 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
ATP2A1O14983 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A1O14983 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2A1O14983 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
ATP2A1O14983 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.18■□□□□ 0.98
ATP2A1O14983 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP2A1O14983 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP2A1O14983 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A1O14983 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A1O14983 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A1O14983 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2A1O14983 KRT17P6-201ENST00000453795 1220 ntBASIC21.17■□□□□ 0.98
ATP2A1O14983 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ATP2A1O14983 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A1O14983 AC233702.3-201ENST00000578656 1387 ntBASIC21.17■□□□□ 0.98
ATP2A1O14983 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP2A1O14983 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A1O14983 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2A1O14983 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP2A1O14983 AC007952.6-201ENST00000573168 2673 ntBASIC21.16■□□□□ 0.98
ATP2A1O14983 AC003957.1-201ENST00000625108 2673 ntBASIC21.16■□□□□ 0.98
ATP2A1O14983 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A1O14983 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP2A1O14983 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A1O14983 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A1O14983 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A1O14983 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A1O14983 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A1O14983 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A1O14983 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
ATP2A1O14983 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
ATP2A1O14983 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2A1O14983 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP2A1O14983 AL121772.3-201ENST00000610840 674 ntBASIC21.16■□□□□ 0.98
ATP2A1O14983 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2A1O14983 AL161938.1-201ENST00000569833 2180 ntBASIC21.16■□□□□ 0.98
ATP2A1O14983 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
ATP2A1O14983 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP2A1O14983 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 AL353692.3-201ENST00000407031 1396 ntBASIC21.15■□□□□ 0.98
ATP2A1O14983 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2A1O14983 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
ATP2A1O14983 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A1O14983 AL845331.1-201ENST00000424978 1190 ntBASIC21.15■□□□□ 0.98
ATP2A1O14983 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.15■□□□□ 0.98
ATP2A1O14983 FDX1P1-201ENST00000449115 551 ntBASIC21.15■□□□□ 0.98
ATP2A1O14983 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2A1O14983 GUSBP12-201ENST00000513727 720 ntBASIC21.15■□□□□ 0.98
ATP2A1O14983 PNN-202ENST00000553331 656 ntTSL 3 BASIC21.15■□□□□ 0.98
ATP2A1O14983 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A1O14983 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.15■□□□□ 0.98
ATP2A1O14983 IFNL4P1-201ENST00000607083 540 ntBASIC21.15■□□□□ 0.98
ATP2A1O14983 AL592071.1-201ENST00000611956 408 ntBASIC21.15■□□□□ 0.98
ATP2A1O14983 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
ATP2A1O14983 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A1O14983 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2A1O14983 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2A1O14983 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2A1O14983 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP2A1O14983 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP2A1O14983 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATP2A1O14983 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2A1O14983 HES2-202ENST00000377836 507 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP2A1O14983 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2A1O14983 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.14■□□□□ 0.97
ATP2A1O14983 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
ATP2A1O14983 IGHV3-47-201ENST00000425060 335 ntBASIC21.14■□□□□ 0.97
ATP2A1O14983 AC246785.2-201ENST00000432512 513 ntBASIC21.14■□□□□ 0.97
ATP2A1O14983 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2A1O14983 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC21.14■□□□□ 0.97
ATP2A1O14983 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP2A1O14983 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.14■□□□□ 0.97
ATP2A1O14983 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ATP2A1O14983 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2A1O14983 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms