Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 FAM197Y8-203ENST00000450145 560 ntBASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 AL390719.2-201ENST00000606993 987 ntBASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 AC104417.2-201ENST00000562989 1793 ntBASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TRABD2BA6NFA1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 AC009237.14-201ENST00000609975 1594 ntBASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRABD2BA6NFA1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TRABD2BA6NFA1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRABD2BA6NFA1 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.77■□□□□ 0.43
TRABD2BA6NFA1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRABD2BA6NFA1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.77■□□□□ 0.43
TRABD2BA6NFA1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 PMS2P7-201ENST00000506558 1336 ntBASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 AL031284.1-201ENST00000419297 478 ntBASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 TERC-201ENST00000602385 541 ntBASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRABD2BA6NFA1 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRABD2BA6NFA1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms