Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 AL049840.3-201ENST00000602669 611 ntBASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC163A0A0D9SF12 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 PGAM5P1-201ENST00000518923 814 ntBASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 AC027601.4-201ENST00000611259 610 ntBASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 FAM197Y3-203ENST00000618346 717 ntBASIC18.27■□□□□ 0.52
CCDC163A0A0D9SF12 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC163A0A0D9SF12 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC163A0A0D9SF12 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC163A0A0D9SF12 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC163A0A0D9SF12 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CCDC163A0A0D9SF12 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC163A0A0D9SF12 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC163A0A0D9SF12 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 HNRNPDP1-201ENST00000439535 754 ntBASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 AL591424.1-201ENST00000442569 1213 ntBASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 IGHV3-22-201ENST00000520721 359 ntBASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 AC005336.2-201ENST00000593183 939 ntBASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 AC092667.1-201ENST00000434301 2586 ntBASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 AL357033.4-201ENST00000617703 1807 ntBASIC18.26■□□□□ 0.51
CCDC163A0A0D9SF12 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.25■□□□□ 0.51
CCDC163A0A0D9SF12 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms