Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 AC141586.3-201ENST00000562166 1838 ntBASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
HCFC2Q9Y5Z7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 AC114341.1-201ENST00000618070 349 ntBASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 AL357033.4-201ENST00000617703 1807 ntBASIC19.35■□□□□ 0.69
HCFC2Q9Y5Z7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 AC008608.2-201ENST00000606089 416 ntBASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
HCFC2Q9Y5Z7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCFC2Q9Y5Z7 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCFC2Q9Y5Z7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HCFC2Q9Y5Z7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HCFC2Q9Y5Z7 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCFC2Q9Y5Z7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.33■□□□□ 0.69
HCFC2Q9Y5Z7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HCFC2Q9Y5Z7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
HCFC2Q9Y5Z7 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 AC093909.1-201ENST00000504731 1122 ntBASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 KRT18P58-201ENST00000527480 1120 ntBASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
HCFC2Q9Y5Z7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.32■□□□□ 0.68
HCFC2Q9Y5Z7 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms