Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
GNEQ9Y223 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
GNEQ9Y223 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 TSPY12P-201ENST00000421279 868 ntBASIC20.64■□□□□ 0.89
GNEQ9Y223 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.64■□□□□ 0.89
GNEQ9Y223 AF238378.1-201ENST00000526806 358 ntBASIC20.64■□□□□ 0.89
GNEQ9Y223 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.64■□□□□ 0.89
GNEQ9Y223 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.64■□□□□ 0.89
GNEQ9Y223 AC004263.2-201ENST00000617183 678 ntBASIC20.64■□□□□ 0.89
GNEQ9Y223 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
GNEQ9Y223 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
GNEQ9Y223 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
GNEQ9Y223 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
GNEQ9Y223 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
GNEQ9Y223 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.63■□□□□ 0.89
GNEQ9Y223 AC011840.4-201ENST00000578471 627 ntBASIC20.63■□□□□ 0.89
GNEQ9Y223 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.63■□□□□ 0.89
GNEQ9Y223 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC20.63■□□□□ 0.89
GNEQ9Y223 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
GNEQ9Y223 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
GNEQ9Y223 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
GNEQ9Y223 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 AL032819.2-201ENST00000624543 2162 ntBASIC20.62■□□□□ 0.89
GNEQ9Y223 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
GNEQ9Y223 NUS1P2-201ENST00000417358 873 ntBASIC20.62■□□□□ 0.89
GNEQ9Y223 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.62■□□□□ 0.89
GNEQ9Y223 AC079776.4-201ENST00000511039 504 ntBASIC20.62■□□□□ 0.89
GNEQ9Y223 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
GNEQ9Y223 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.62■□□□□ 0.89
GNEQ9Y223 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.62■□□□□ 0.89
GNEQ9Y223 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
GNEQ9Y223 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
GNEQ9Y223 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.62■□□□□ 0.89
GNEQ9Y223 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.61■□□□□ 0.89
GNEQ9Y223 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GNEQ9Y223 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
GNEQ9Y223 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.61■□□□□ 0.89
GNEQ9Y223 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GNEQ9Y223 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
GNEQ9Y223 AP000593.1-201ENST00000393668 712 ntBASIC20.61■□□□□ 0.89
GNEQ9Y223 POM121L3P-201ENST00000419331 1163 ntBASIC20.61■□□□□ 0.89
GNEQ9Y223 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GNEQ9Y223 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GNEQ9Y223 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
GNEQ9Y223 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.61■□□□□ 0.89
GNEQ9Y223 BNIP3P18-201ENST00000593976 575 ntBASIC20.61■□□□□ 0.89
GNEQ9Y223 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
GNEQ9Y223 AC023511.2-201ENST00000618803 211 ntBASIC20.61■□□□□ 0.89
GNEQ9Y223 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
GNEQ9Y223 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
GNEQ9Y223 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
GNEQ9Y223 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.61■□□□□ 0.89
GNEQ9Y223 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GNEQ9Y223 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.6■□□□□ 0.89
GNEQ9Y223 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
GNEQ9Y223 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.6■□□□□ 0.89
GNEQ9Y223 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GNEQ9Y223 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.6■□□□□ 0.89
GNEQ9Y223 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GNEQ9Y223 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.6■□□□□ 0.89
GNEQ9Y223 RNA5SP419-201ENST00000515908 135 ntBASIC20.6■□□□□ 0.89
GNEQ9Y223 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
GNEQ9Y223 TP73-AS1-207ENST00000624167 988 ntBASIC20.6■□□□□ 0.89
GNEQ9Y223 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GNEQ9Y223 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
GNEQ9Y223 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.6■□□□□ 0.89
GNEQ9Y223 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
GNEQ9Y223 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.6■□□□□ 0.89
GNEQ9Y223 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.59■□□□□ 0.89
GNEQ9Y223 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.59■□□□□ 0.89
GNEQ9Y223 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.59■□□□□ 0.89
GNEQ9Y223 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
GNEQ9Y223 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms