Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.42
PDZRN3Q9UPQ7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
PDZRN3Q9UPQ7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC23.89■■□□□ 1.42
PDZRN3Q9UPQ7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC23.89■■□□□ 1.41
PDZRN3Q9UPQ7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 AC009113.1-201ENST00000570267 2443 ntBASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 KRT8P11-201ENST00000409686 1436 ntBASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 SPDYE13P-201ENST00000445314 798 ntBASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 AC034232.1-201ENST00000506026 1064 ntBASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 AC111152.3-201ENST00000569699 673 ntBASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
PDZRN3Q9UPQ7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 FAAHP1-202ENST00000446499 1238 ntBASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 AC092329.2-201ENST00000598402 547 ntBASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 FEM1AP3-201ENST00000403722 1741 ntBASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PDZRN3Q9UPQ7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 AC093525.10-201ENST00000625130 1569 ntBASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 AC004870.1-201ENST00000315132 882 ntBASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 AL645929.1-201ENST00000420084 975 ntBASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 TSPY21P-201ENST00000433481 731 ntBASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 TSPY23P-201ENST00000440136 739 ntBASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 FDX1P1-201ENST00000449115 551 ntBASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 PRELID1P1-202ENST00000567272 903 ntBASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 RN7SL510P-201ENST00000581311 263 ntBASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC23.86■■□□□ 1.41
PDZRN3Q9UPQ7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PDZRN3Q9UPQ7 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms