Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIPK3Q9H422 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIPK3Q9H422 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIPK3Q9H422 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.23■□□□□ 0.83
HIPK3Q9H422 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.23■□□□□ 0.83
HIPK3Q9H422 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HIPK3Q9H422 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 IRX1P1-201ENST00000438849 1838 ntBASIC20.22■□□□□ 0.83
HIPK3Q9H422 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 PMS2P7-201ENST00000506558 1336 ntBASIC20.22■□□□□ 0.83
HIPK3Q9H422 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIPK3Q9H422 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 AC132008.2-207ENST00000454517 770 ntBASIC20.21■□□□□ 0.83
HIPK3Q9H422 AC018712.1-201ENST00000455767 687 ntBASIC20.21■□□□□ 0.83
HIPK3Q9H422 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 TERC-201ENST00000602385 541 ntBASIC20.21■□□□□ 0.83
HIPK3Q9H422 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 LINC01006-201ENST00000333319 2292 ntBASIC20.21■□□□□ 0.83
HIPK3Q9H422 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 LINC01521-201ENST00000504184 1943 ntBASIC20.21■□□□□ 0.83
HIPK3Q9H422 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HIPK3Q9H422 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HIPK3Q9H422 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 MIR940-201ENST00000401276 94 ntBASIC20.2■□□□□ 0.82
HIPK3Q9H422 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 AC092183.1-201ENST00000469884 875 ntBASIC20.2■□□□□ 0.82
HIPK3Q9H422 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 AC007952.6-201ENST00000573168 2673 ntBASIC20.2■□□□□ 0.82
HIPK3Q9H422 AC003957.1-201ENST00000625108 2673 ntBASIC20.2■□□□□ 0.82
HIPK3Q9H422 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.2■□□□□ 0.82
HIPK3Q9H422 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HIPK3Q9H422 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HIPK3Q9H422 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.19■□□□□ 0.82
HIPK3Q9H422 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms