Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.66■□□□□ 0.26
SNRNP40Q96DI7 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 SLC25A1P1-201ENST00000528351 927 ntBASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 AL591684.3-201ENST00000605187 298 ntBASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 KRT89P-201ENST00000620027 1478 ntBASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SNRNP40Q96DI7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SNRNP40Q96DI7 LINC01521-201ENST00000504184 1943 ntBASIC16.64■□□□□ 0.26
SNRNP40Q96DI7 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 AL031284.1-201ENST00000419297 478 ntBASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 AC009065.1-201ENST00000564055 1225 ntBASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SNRNP40Q96DI7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 KRT18P67-201ENST00000432816 1264 ntBASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 AF186996.4-201ENST00000467186 377 ntBASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 MIR5100-201ENST00000579544 119 ntBASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SNRNP40Q96DI7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms