Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TNFRSF25Q93038 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 KRT18P57-201ENST00000443599 1254 ntBASIC21.06■□□□□ 0.96
TNFRSF25Q93038 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 MIR3917-201ENST00000580971 93 ntBASIC21.06■□□□□ 0.96
TNFRSF25Q93038 AC006011.2-201ENST00000621313 1158 ntBASIC21.06■□□□□ 0.96
TNFRSF25Q93038 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 AC135776.1-201ENST00000319817 2481 ntBASIC21.06■□□□□ 0.96
TNFRSF25Q93038 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TNFRSF25Q93038 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 RCN1P1-201ENST00000400413 996 ntBASIC21.05■□□□□ 0.96
TNFRSF25Q93038 AC117947.1-201ENST00000427448 529 ntBASIC21.05■□□□□ 0.96
TNFRSF25Q93038 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.05■□□□□ 0.96
TNFRSF25Q93038 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 AP000523.1-201ENST00000398242 1049 ntBASIC21.04■□□□□ 0.96
TNFRSF25Q93038 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 COX11P1-201ENST00000489116 835 ntBASIC21.04■□□□□ 0.96
TNFRSF25Q93038 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 AC139887.4-201ENST00000607877 719 ntBASIC21.04■□□□□ 0.96
TNFRSF25Q93038 AC011558.1-201ENST00000623459 338 ntBASIC21.04■□□□□ 0.96
TNFRSF25Q93038 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TNFRSF25Q93038 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 LIN28AP1-201ENST00000429574 405 ntBASIC21.03■□□□□ 0.96
TNFRSF25Q93038 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 BX664615.1-201ENST00000443558 458 ntBASIC21.03■□□□□ 0.96
TNFRSF25Q93038 YBX1P2-201ENST00000489612 999 ntBASIC21.03■□□□□ 0.96
TNFRSF25Q93038 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 AL157888.1-201ENST00000631930 593 ntBASIC21.03■□□□□ 0.96
TNFRSF25Q93038 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC21.03■□□□□ 0.96
TNFRSF25Q93038 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms