Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
SEMA4DQ92854 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SEMA4DQ92854 AC073508.3-201ENST00000619697 1419 ntBASIC19.93■□□□□ 0.78
SEMA4DQ92854 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 TERF1P1-201ENST00000311003 1181 ntBASIC19.93■□□□□ 0.78
SEMA4DQ92854 SEC1P-202ENST00000473944 940 ntBASIC19.93■□□□□ 0.78
SEMA4DQ92854 AC104390.1-201ENST00000555663 520 ntBASIC19.93■□□□□ 0.78
SEMA4DQ92854 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 AC024243.1-201ENST00000609234 778 ntBASIC19.93■□□□□ 0.78
SEMA4DQ92854 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 KRT8P7-201ENST00000533003 1432 ntBASIC19.93■□□□□ 0.78
SEMA4DQ92854 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.93■□□□□ 0.78
SEMA4DQ92854 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SEMA4DQ92854 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AL163051.1-201ENST00000569214 1512 ntBASIC19.92■□□□□ 0.78
SEMA4DQ92854 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 BICD1-207ENST00000551848 1962 ntBASIC19.92■□□□□ 0.78
SEMA4DQ92854 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AC113347.1-201ENST00000413321 391 ntBASIC19.92■□□□□ 0.78
SEMA4DQ92854 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AC005363.2-201ENST00000618631 242 ntBASIC19.92■□□□□ 0.78
SEMA4DQ92854 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SEMA4DQ92854 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SEMA4DQ92854 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SEMA4DQ92854 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SEMA4DQ92854 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms