Protein–RNA interactions for Protein: Q92616

GCN1, eIF-2-alpha kinase activator GCN1, humanhuman

Known RBP Predictions only

Length 2,671 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1Q92616 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC16.12■□□□□ 0.17
GCN1Q92616 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC16.12■□□□□ 0.17
GCN1Q92616 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.12■□□□□ 0.17
GCN1Q92616 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
GCN1Q92616 AL133338.1-201ENST00000565695 1517 ntBASIC16.12■□□□□ 0.17
GCN1Q92616 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.12■□□□□ 0.17
GCN1Q92616 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.12■□□□□ 0.17
GCN1Q92616 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GCN1Q92616 AL662799.1-202ENST00000614205 422 ntBASIC16.12■□□□□ 0.17
GCN1Q92616 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
GCN1Q92616 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
GCN1Q92616 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
GCN1Q92616 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.11■□□□□ 0.17
GCN1Q92616 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.11■□□□□ 0.17
GCN1Q92616 CNN2P2-201ENST00000443536 909 ntBASIC16.11■□□□□ 0.17
GCN1Q92616 CNN2P3-201ENST00000450201 906 ntBASIC16.11■□□□□ 0.17
GCN1Q92616 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.11■□□□□ 0.17
GCN1Q92616 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 AL353135.1-201ENST00000606729 504 ntBASIC16.11■□□□□ 0.17
GCN1Q92616 AL136317.3-201ENST00000618497 906 ntBASIC16.11■□□□□ 0.17
GCN1Q92616 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 CU639417.3-201ENST00000624240 1404 ntBASIC16.11■□□□□ 0.17
GCN1Q92616 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.11■□□□□ 0.17
GCN1Q92616 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 AC105339.1-204ENST00000636249 355 ntBASIC16.11■□□□□ 0.17
GCN1Q92616 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.11■□□□□ 0.17
GCN1Q92616 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
GCN1Q92616 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
GCN1Q92616 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC16.1■□□□□ 0.17
GCN1Q92616 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.1■□□□□ 0.17
GCN1Q92616 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
GCN1Q92616 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.1■□□□□ 0.17
GCN1Q92616 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
GCN1Q92616 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.1■□□□□ 0.17
GCN1Q92616 MIR943-201ENST00000401286 94 ntBASIC16.1■□□□□ 0.17
GCN1Q92616 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.1■□□□□ 0.17
GCN1Q92616 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.1■□□□□ 0.17
GCN1Q92616 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 AL033527.4-201ENST00000641026 673 ntBASIC16.1■□□□□ 0.17
GCN1Q92616 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC16.1■□□□□ 0.17
GCN1Q92616 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
GCN1Q92616 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.1■□□□□ 0.17
GCN1Q92616 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.1■□□□□ 0.17
GCN1Q92616 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.1■□□□□ 0.17
GCN1Q92616 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 GOLGA6L11P-201ENST00000417252 1298 ntBASIC16.1■□□□□ 0.17
GCN1Q92616 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.1■□□□□ 0.17
GCN1Q92616 AC108073.2-201ENST00000464002 357 ntBASIC16.1■□□□□ 0.17
GCN1Q92616 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.1■□□□□ 0.17
GCN1Q92616 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
GCN1Q92616 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.1■□□□□ 0.17
GCN1Q92616 AC112777.1-201ENST00000540175 1423 ntBASIC16.09■□□□□ 0.17
GCN1Q92616 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC16.09■□□□□ 0.17
GCN1Q92616 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
GCN1Q92616 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.09■□□□□ 0.17
GCN1Q92616 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCN1Q92616 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.09■□□□□ 0.17
GCN1Q92616 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCN1Q92616 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
GCN1Q92616 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
GCN1Q92616 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.09■□□□□ 0.17
GCN1Q92616 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCN1Q92616 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.09■□□□□ 0.17
GCN1Q92616 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.09■□□□□ 0.17
GCN1Q92616 AC017083.2-201ENST00000608069 979 ntBASIC16.09■□□□□ 0.17
GCN1Q92616 AC005593.1-201ENST00000624894 515 ntBASIC16.09■□□□□ 0.17
GCN1Q92616 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCN1Q92616 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
GCN1Q92616 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
GCN1Q92616 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.09■□□□□ 0.17
GCN1Q92616 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.09■□□□□ 0.17
GCN1Q92616 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.09■□□□□ 0.17
GCN1Q92616 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.09■□□□□ 0.17
GCN1Q92616 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms