Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
U2AF1L4Q8WU68 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 AL023284.2-201ENST00000405850 579 ntBASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 REXO1L6P-202ENST00000619970 1078 ntBASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 AC093484.2-201ENST00000580996 2166 ntBASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2AF1L4Q8WU68 AIRN-201ENST00000601203 4374 ntBASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 AF238378.1-201ENST00000526806 358 ntBASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 Z69720.1-201ENST00000601483 472 ntBASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 IGHV3-41-201ENST00000613121 348 ntBASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 TP73-AS1-207ENST00000624167 988 ntBASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
U2AF1L4Q8WU68 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 POLD2P1-201ENST00000511220 997 ntBASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 MIR3180-5-201ENST00000583743 153 ntBASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 AL773604.1-201ENST00000617417 272 ntBASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 AC112497.1-201ENST00000624824 639 ntBASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 AC005332.7-201ENST00000614046 2005 ntBASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2AF1L4Q8WU68 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
U2AF1L4Q8WU68 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
U2AF1L4Q8WU68 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
U2AF1L4Q8WU68 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.14■□□□□ 0.98
U2AF1L4Q8WU68 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.14■□□□□ 0.97
U2AF1L4Q8WU68 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms