Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
NPAS4Q8IUM7 MTMR9LP-203ENST00000426597 1545 ntBASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 TSPY12P-201ENST00000421279 868 ntBASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 AF238378.1-201ENST00000526806 358 ntBASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 AC064862.7-201ENST00000604520 867 ntBASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.86■□□□□ 0.77
NPAS4Q8IUM7 AL032819.2-201ENST00000624543 2162 ntBASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.85■□□□□ 0.77
NPAS4Q8IUM7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 BNIP3P18-201ENST00000593976 575 ntBASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 BX640515.1-201ENST00000617215 977 ntBASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NPAS4Q8IUM7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 AC008687.5-201ENST00000593746 558 ntBASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 AC120114.3-201ENST00000611923 658 ntBASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 TP73-AS1-207ENST00000624167 988 ntBASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.83■□□□□ 0.77
NPAS4Q8IUM7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS4Q8IUM7 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
NPAS4Q8IUM7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS4Q8IUM7 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
NPAS4Q8IUM7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NPAS4Q8IUM7 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms