Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 AP003733.1-201ENST00000491725 852 ntBASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 TERC-201ENST00000602385 541 ntBASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 AL163051.1-201ENST00000569214 1512 ntBASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 KRT89P-201ENST00000620027 1478 ntBASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 TP73-AS1-210ENST00000637775 1455 ntBASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 AL355385.1-201ENST00000606123 409 ntBASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
VPS13DQ5THJ4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 GPX1P2-201ENST00000429271 606 ntBASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 VENTXP7-201ENST00000475503 772 ntBASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 AC140113.2-201ENST00000604370 208 ntBASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 GUSBP12-201ENST00000513727 720 ntBASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 AC005104.2-201ENST00000427818 678 ntBASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 AC114341.1-201ENST00000618070 349 ntBASIC12.44□□□□□ -0.42
VPS13DQ5THJ4 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 AP005117.1-201ENST00000584346 1413 ntBASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
VPS13DQ5THJ4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms