Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC006557.2-201ENST00000592985 1240 ntBASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 AC008687.5-201ENST00000593746 558 ntBASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL13A1Q5TAT6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 TMEM261P1-201ENST00000604899 340 ntBASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
COL13A1Q5TAT6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 ELK2AP-201ENST00000392510 1007 ntBASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 AC051619.7-201ENST00000568314 623 ntBASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 AC017083.2-201ENST00000608069 979 ntBASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
COL13A1Q5TAT6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 MIR1909-201ENST00000411312 80 ntBASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 SLC25A39P2-201ENST00000537614 270 ntBASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 AC091812.2-201ENST00000619081 385 ntBASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 AC004877.2-201ENST00000623941 599 ntBASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
COL13A1Q5TAT6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 BX005266.1-201ENST00000473402 457 ntBASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 FAM8A2P-201ENST00000528813 1142 ntBASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL13A1Q5TAT6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms