Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC012313.10-201ENST00000623509 926 ntBASIC22.21■■□□□ 1.15
PDS5AQ29RF7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC22.21■■□□□ 1.15
PDS5AQ29RF7 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.15
PDS5AQ29RF7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.15
PDS5AQ29RF7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 DDT-203ENST00000403754 569 ntTSL 3 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 DDT-206ENST00000430101 573 ntTSL 2 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 AC012615.1-201ENST00000565797 1299 ntBASIC22.2■■□□□ 1.14
PDS5AQ29RF7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 AL353801.3-201ENST00000609898 542 ntBASIC22.2■■□□□ 1.14
PDS5AQ29RF7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PDS5AQ29RF7 AL024508.2-201ENST00000607749 1894 ntBASIC22.2■■□□□ 1.14
PDS5AQ29RF7 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PDS5AQ29RF7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 TOB2P1-201ENST00000469761 992 ntBASIC22.18■■□□□ 1.14
PDS5AQ29RF7 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PDS5AQ29RF7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 AC246785.2-201ENST00000432512 513 ntBASIC22.17■■□□□ 1.14
PDS5AQ29RF7 SDHD-206ENST00000528182 754 ntTSL 3 BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 PRELID1P1-202ENST00000567272 903 ntBASIC22.17■■□□□ 1.14
PDS5AQ29RF7 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PDS5AQ29RF7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 LINC00265-3P-201ENST00000447588 903 ntBASIC22.16■■□□□ 1.14
PDS5AQ29RF7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC22.16■■□□□ 1.14
PDS5AQ29RF7 GUSBP12-201ENST00000513727 720 ntBASIC22.16■■□□□ 1.14
PDS5AQ29RF7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms