Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 KRT16P5-201ENST00000455284 522 ntBASIC14.21□□□□□ -0.13
HIST1H1AQ02539 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
HIST1H1AQ02539 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HIST1H1AQ02539 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 GOLGA6L5P-202ENST00000515341 1828 ntBASIC14.2□□□□□ -0.14
HIST1H1AQ02539 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 BICD1-207ENST00000551848 1962 ntBASIC14.2□□□□□ -0.14
HIST1H1AQ02539 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 TSPY23P-201ENST00000440136 739 ntBASIC14.2□□□□□ -0.14
HIST1H1AQ02539 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 AC006058.3-201ENST00000606217 1069 ntBASIC14.2□□□□□ -0.14
HIST1H1AQ02539 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 TNRC18P3-201ENST00000441896 2691 ntBASIC14.2□□□□□ -0.14
HIST1H1AQ02539 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.2□□□□□ -0.14
HIST1H1AQ02539 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 GAS2L1P1-201ENST00000420145 1480 ntBASIC14.19□□□□□ -0.14
HIST1H1AQ02539 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 AC124016.1-201ENST00000609552 612 ntBASIC14.19□□□□□ -0.14
HIST1H1AQ02539 AC110285.5-201ENST00000611501 352 ntBASIC14.19□□□□□ -0.14
HIST1H1AQ02539 AC083906.6-201ENST00000641366 219 ntBASIC14.19□□□□□ -0.14
HIST1H1AQ02539 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HIST1H1AQ02539 AC141586.5-201ENST00000624546 2050 ntBASIC14.19□□□□□ -0.14
HIST1H1AQ02539 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms