Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ACLYP53396 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACLYP53396 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.4■□□□□ 0.86
ACLYP53396 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACLYP53396 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
ACLYP53396 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ACLYP53396 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.4■□□□□ 0.86
ACLYP53396 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.4■□□□□ 0.86
ACLYP53396 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.4■□□□□ 0.86
ACLYP53396 RCN1P2-201ENST00000398357 915 ntBASIC20.4■□□□□ 0.86
ACLYP53396 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.4■□□□□ 0.86
ACLYP53396 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ACLYP53396 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACLYP53396 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.4■□□□□ 0.86
ACLYP53396 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.4■□□□□ 0.86
ACLYP53396 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.4■□□□□ 0.86
ACLYP53396 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.4■□□□□ 0.86
ACLYP53396 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.4■□□□□ 0.86
ACLYP53396 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
ACLYP53396 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.4■□□□□ 0.86
ACLYP53396 AL355877.3-201ENST00000622820 899 ntBASIC20.4■□□□□ 0.86
ACLYP53396 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
ACLYP53396 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ACLYP53396 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ACLYP53396 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ACLYP53396 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.39■□□□□ 0.85
ACLYP53396 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACLYP53396 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ACLYP53396 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACLYP53396 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ACLYP53396 MIR940-201ENST00000401276 94 ntBASIC20.39■□□□□ 0.85
ACLYP53396 FGFR3P6-201ENST00000457012 610 ntBASIC20.39■□□□□ 0.85
ACLYP53396 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.39■□□□□ 0.85
ACLYP53396 AC073648.2-201ENST00000510116 352 ntBASIC20.39■□□□□ 0.85
ACLYP53396 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.39■□□□□ 0.85
ACLYP53396 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.39■□□□□ 0.85
ACLYP53396 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.39■□□□□ 0.85
ACLYP53396 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.39■□□□□ 0.85
ACLYP53396 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ACLYP53396 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ACLYP53396 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ACLYP53396 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.85
ACLYP53396 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ACLYP53396 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ACLYP53396 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ACLYP53396 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ACLYP53396 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACLYP53396 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.38■□□□□ 0.85
ACLYP53396 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.38■□□□□ 0.85
ACLYP53396 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.38■□□□□ 0.85
ACLYP53396 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACLYP53396 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ACLYP53396 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.38■□□□□ 0.85
ACLYP53396 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.38■□□□□ 0.85
ACLYP53396 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.38■□□□□ 0.85
ACLYP53396 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.38■□□□□ 0.85
ACLYP53396 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.38■□□□□ 0.85
ACLYP53396 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ACLYP53396 FAM215A-202ENST00000632077 792 ntBASIC20.38■□□□□ 0.85
ACLYP53396 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACLYP53396 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.38■□□□□ 0.85
ACLYP53396 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ACLYP53396 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.38■□□□□ 0.85
ACLYP53396 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
ACLYP53396 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ACLYP53396 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.37■□□□□ 0.85
ACLYP53396 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.37■□□□□ 0.85
ACLYP53396 SCARNA2-201ENST00000458748 420 ntBASIC20.37■□□□□ 0.85
ACLYP53396 AC092183.1-201ENST00000469884 875 ntBASIC20.37■□□□□ 0.85
ACLYP53396 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.37■□□□□ 0.85
ACLYP53396 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.37■□□□□ 0.85
ACLYP53396 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
ACLYP53396 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.37■□□□□ 0.85
ACLYP53396 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.37■□□□□ 0.85
ACLYP53396 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.37■□□□□ 0.85
ACLYP53396 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.37■□□□□ 0.85
ACLYP53396 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.37■□□□□ 0.85
ACLYP53396 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.37■□□□□ 0.85
ACLYP53396 AC005336.2-201ENST00000593183 939 ntBASIC20.37■□□□□ 0.85
ACLYP53396 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 HEIH-201ENST00000623091 1652 ntBASIC20.37■□□□□ 0.85
ACLYP53396 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.37■□□□□ 0.85
ACLYP53396 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
ACLYP53396 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ACLYP53396 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.37■□□□□ 0.85
ACLYP53396 TP73-AS1-210ENST00000637775 1455 ntBASIC20.37■□□□□ 0.85
ACLYP53396 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.36■□□□□ 0.85
ACLYP53396 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACLYP53396 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.36■□□□□ 0.85
ACLYP53396 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ACLYP53396 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ACLYP53396 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms