Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PDE6CP51160 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PDE6CP51160 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PDE6CP51160 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 BX664615.1-201ENST00000443558 458 ntBASIC20.03■□□□□ 0.8
PDE6CP51160 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PDE6CP51160 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDE6CP51160 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.03■□□□□ 0.8
PDE6CP51160 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDE6CP51160 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6CP51160 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PDE6CP51160 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6CP51160 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PDE6CP51160 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDE6CP51160 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
PDE6CP51160 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
PDE6CP51160 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.02■□□□□ 0.8
PDE6CP51160 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.02■□□□□ 0.8
PDE6CP51160 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6CP51160 AC010203.1-204ENST00000548782 407 ntBASIC20.02■□□□□ 0.8
PDE6CP51160 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
PDE6CP51160 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.02■□□□□ 0.8
PDE6CP51160 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6CP51160 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PDE6CP51160 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.02■□□□□ 0.8
PDE6CP51160 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDE6CP51160 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.02■□□□□ 0.8
PDE6CP51160 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
PDE6CP51160 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PDE6CP51160 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE6CP51160 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDE6CP51160 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDE6CP51160 AC092338.2-201ENST00000568827 1415 ntBASIC20.02■□□□□ 0.79
PDE6CP51160 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDE6CP51160 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
PDE6CP51160 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PDE6CP51160 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE6CP51160 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.01■□□□□ 0.79
PDE6CP51160 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE6CP51160 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE6CP51160 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
PDE6CP51160 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
PDE6CP51160 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.01■□□□□ 0.79
PDE6CP51160 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 AC007663.1-201ENST00000438948 1240 ntBASIC20.01■□□□□ 0.79
PDE6CP51160 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.01■□□□□ 0.79
PDE6CP51160 AL353719.1-201ENST00000566847 864 ntBASIC20.01■□□□□ 0.79
PDE6CP51160 AL023803.3-201ENST00000615559 522 ntBASIC20.01■□□□□ 0.79
PDE6CP51160 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 AL357033.4-201ENST00000617703 1807 ntBASIC20.01■□□□□ 0.79
PDE6CP51160 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
PDE6CP51160 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
PDE6CP51160 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDE6CP51160 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
PDE6CP51160 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms