Protein–RNA interactions for Protein: P10586

PTPRF, Receptor-type tyrosine-protein phosphatase F, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRFP10586 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.26■□□□□ 0.99
PTPRFP10586 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PTPRFP10586 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PTPRFP10586 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PTPRFP10586 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPRFP10586 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PTPRFP10586 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPRFP10586 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PTPRFP10586 IGHV3-22-201ENST00000520721 359 ntBASIC21.25■□□□□ 0.99
PTPRFP10586 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.25■□□□□ 0.99
PTPRFP10586 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPRFP10586 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPRFP10586 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPRFP10586 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPRFP10586 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPRFP10586 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPRFP10586 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPRFP10586 MIR149-201ENST00000384879 89 ntBASIC21.25■□□□□ 0.99
PTPRFP10586 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PTPRFP10586 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC21.25■□□□□ 0.99
PTPRFP10586 AF186996.4-201ENST00000467186 377 ntBASIC21.25■□□□□ 0.99
PTPRFP10586 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC21.25■□□□□ 0.99
PTPRFP10586 AC073648.2-201ENST00000510116 352 ntBASIC21.25■□□□□ 0.99
PTPRFP10586 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
PTPRFP10586 AC139887.3-201ENST00000568585 713 ntBASIC21.25■□□□□ 0.99
PTPRFP10586 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPRFP10586 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPRFP10586 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PTPRFP10586 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.25■□□□□ 0.99
PTPRFP10586 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PTPRFP10586 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPRFP10586 POM121L3P-201ENST00000419331 1163 ntBASIC21.24■□□□□ 0.99
PTPRFP10586 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC21.24■□□□□ 0.99
PTPRFP10586 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPRFP10586 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC21.24■□□□□ 0.99
PTPRFP10586 AC114341.1-201ENST00000618070 349 ntBASIC21.24■□□□□ 0.99
PTPRFP10586 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPRFP10586 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PTPRFP10586 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.24■□□□□ 0.99
PTPRFP10586 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PTPRFP10586 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPRFP10586 AL163051.1-201ENST00000569214 1512 ntBASIC21.24■□□□□ 0.99
PTPRFP10586 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPRFP10586 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PTPRFP10586 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC21.23■□□□□ 0.99
PTPRFP10586 LITAF-211ENST00000572255 516 ntTSL 4 BASIC21.23■□□□□ 0.99
PTPRFP10586 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PTPRFP10586 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC21.23■□□□□ 0.99
PTPRFP10586 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPRFP10586 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.23■□□□□ 0.99
PTPRFP10586 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPRFP10586 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PTPRFP10586 FGFR3P6-201ENST00000457012 610 ntBASIC21.23■□□□□ 0.99
PTPRFP10586 PGAM5P1-201ENST00000518923 814 ntBASIC21.23■□□□□ 0.99
PTPRFP10586 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.23■□□□□ 0.99
PTPRFP10586 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
PTPRFP10586 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
PTPRFP10586 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PTPRFP10586 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.23■□□□□ 0.99
PTPRFP10586 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PTPRFP10586 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PTPRFP10586 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPRFP10586 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPRFP10586 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPRFP10586 POLD2P1-201ENST00000511220 997 ntBASIC21.22■□□□□ 0.99
PTPRFP10586 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPRFP10586 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PTPRFP10586 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC21.22■□□□□ 0.99
PTPRFP10586 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPRFP10586 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPRFP10586 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
PTPRFP10586 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.22■□□□□ 0.99
PTPRFP10586 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPRFP10586 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPRFP10586 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PTPRFP10586 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PTPRFP10586 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC21.21■□□□□ 0.99
PTPRFP10586 HNRNPDP1-201ENST00000439535 754 ntBASIC21.21■□□□□ 0.99
PTPRFP10586 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.21■□□□□ 0.99
PTPRFP10586 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC21.21■□□□□ 0.99
PTPRFP10586 MOK-208ENST00000519058 917 ntTSL 2 BASIC21.21■□□□□ 0.99
PTPRFP10586 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.21■□□□□ 0.99
PTPRFP10586 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 AC064862.7-201ENST00000604520 867 ntBASIC21.21■□□□□ 0.99
PTPRFP10586 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.21■□□□□ 0.99
PTPRFP10586 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PTPRFP10586 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.21■□□□□ 0.99
PTPRFP10586 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PTPRFP10586 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms